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version 2.0

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@slsevilla slsevilla released this 29 Aug 13:31
· 83 commits to main since this release
v2.0
17ea970
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Learn about vigilant mode.

Creating first version of v2.0 pipeline; significant deviations from v1.8

  • change alignment from novoalign to star
  • change demultiplex software
  • remove MAPQ calculations and BAM changes
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