Development #1285
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Development #1285
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feat: enable CAS based import & extend molecule:clean to query for CAS metadata
* feat: refactor support bubble to block spamming. - use google recaptcha v3 for bot detection - implement rate limiting on support bubble submissions - add server-side validation for gibberish content * copilot review comment fix * decrease the ratelimit * fix: tidy up recaptcha from composer * fix: composer warning suppressed, psr-5 warning resolved --------- Co-authored-by: Venkata Nainala <[email protected]>
* configure laravel CSP * include composer.lock changes * fix pinting issues * Update app/Support/Csp/Policies/NmrxivPolicy.php Co-authored-by: Copilot <[email protected]> * fix pinting issues * Apply suggestion from @Copilot Co-authored-by: Copilot <[email protected]> * fix pinting issues * fix: moved csp-report endpoint to admin routes and removed unused socialite orcid package * chore: pint updates * fix: ziggyvue import updates and also added link to the csp-report in the admin view * chore: prettier formating added * build dev image for CSP --------- Co-authored-by: Copilot <[email protected]> Co-authored-by: Chandu Nainala <[email protected]>
remove the ziggy.js file
…s dashboard (#1277) * feat: Enable search and filtering on projects dashboard - update code to unify project badge logic - move the project badge to a reusable component * prettier formating * run prettier * copilot review changes * add one time command to update project statuses * fix: unmatched return type error fix * fix: style changes to filter button * fix: manifest json regenerated * chore: pint formatting changes * fix: composer update * fix: npm audit fixes --------- Co-authored-by: Venkata Nainala <[email protected]>
* fix: modify nmrxiv policy to fix csp issues * fix:remove single policy addition and make multiple additions for font-src directive * pint formatting * updated policy to include missing directives * update ORCID API endpoint in csp policy * more formatting and removal of duplicates. * NMRIUM_URL * add nmrium in frame-src and connect-src directives * revert dev build tag change * revert missing tags for dev-latest images * deploy latest csp changes * fix:revert dev-build changes
* add test coverage workflow * add .env.ci * use postgres instead of mysql for testing * add meilisearch test config and adjust redis to local for ci * remove healtchecks for redis and meilisearch services * fix the db mismatch issues in CI * fix filesystem driver issue * rectify .env file name * add .env.ci.test with correct DB_PASSWORD * skip ELNSubmissionTrackingTest.php test that requires external API access in CI environment * ELNSubmissionTrackingTest * fixx failing tests * update Code cov token * update test-coverage workflow and .env.ci.test * fix LicenseFactory issue * update composer install command and revert license factory changes * fix env for mielisearch in ci * run test for every commit/sync/pr/merge to dev and main branch * linting fix * skip ELNSubmissionTrackingTest and allow read and write permission for code coverage * inherit secrets * Update PostgreSQL image version to 17 --------- Co-authored-by: Chandu Nainala <[email protected]>
* add test coverage workflow * add .env.ci * use postgres instead of mysql for testing * add meilisearch test config and adjust redis to local for ci * remove healtchecks for redis and meilisearch services * fix the db mismatch issues in CI * fix filesystem driver issue * rectify .env file name * add .env.ci.test with correct DB_PASSWORD * skip ELNSubmissionTrackingTest.php test that requires external API access in CI environment * ELNSubmissionTrackingTest * fixx failing tests * update Code cov token * update test-coverage workflow and .env.ci.test * fix LicenseFactory issue * update composer install command and revert license factory changes * fix env for mielisearch in ci * run test for every commit/sync/pr/merge to dev and main branch * linting fix * skip ELNSubmissionTrackingTest and allow read and write permission for code coverage * inherit secrets * feat: add tests for models * chore: pint formatting of some tests * fix: failing tests due to URL generation and storage issues * run pint formatting * fix: failing tests * run pint formatting * revert test database name --------- Co-authored-by: Chandu Nainala <[email protected]>
* feat: add comprehensive project tests and factories * fix: add unit tests for NMRiumModel * pint formatting * composer update symfony/http-foundation * Update app/Events/ProjectMemberAdded.php Co-authored-by: Copilot <[email protected]> * Update app/Events/AddingProjectMember.php Co-authored-by: Copilot <[email protected]> * Initial plan (#1296) Co-authored-by: copilot-swe-agent[bot] <[email protected]> * :void * Initial plan (#1297) Co-authored-by: copilot-swe-agent[bot] <[email protected]> * revert copilot changes * fix failing tests * revert db name in phpunit.xml * run lint --------- Co-authored-by: Copilot <[email protected]> Co-authored-by: Copilot <[email protected]> Co-authored-by: Chandu Nainala <[email protected]>
* chore: csp optimization remove csp routes and commands, update policy to remove unused sources * review changes * pint and formatting --------- Co-authored-by: Chandu Nainala <[email protected]>
* test: Add API endpoint tests * run pint * fix: copilot review changes * fix: typo * fix: include tests/API suite in phpunit.xml * fix: add more test to increase API test coverage --------- Co-authored-by: Chandu Nainala <[email protected]>
* feat: Add ROR integration for user affiliations * feat: Add ROR integration for author affiliations * test: Add tests for ROR ID integration * fix: Formatting * test: add ror id to author and user models * fix: move ROR api call to a controller * test: Add test for RorController * fix: Add throttling to ROR affiliation search route * fix: run formatting on RorAffiliationTypeahead.vue --------- Co-authored-by: Chandu Nainala <[email protected]>
* fix: CORS issue with ORCID API and refactoring ORCID integration * fix: Add test for ORCID Controller and review changes fix * test: Add missing test for Orcid controller
* test: Add tests for external services and reorganize test structure * test: improve test for FileSystemTest and ManageAuthorsTest, remove obsolete SyncProjectAuthorsActionTest
* fix: update Docker PHP version to 8.4 * fix: update worker Docker PHP version to 8.4 * fix: update worker docker image to dunglas/frankenphp:1-php8.4-alpine * fix: php installation error in dockerfile * fix: revert trigger branch for dev-build * fix: remove unnecessary extension installation in Dockerfile.worker
* test: Add unit tests for job classes * pint formatting * fix: copilot review comments addressed * run pint formatting * fix: failing tests
* fix: Fix the broken recommended standards link * fix: configure MICHi standards URL in config file
…HP worker issue (#1336) * fix: API throttling condition for testing environment to fix FrankenPHP worker issue
* test: resturcture team tests into a dedicated directory * fix: Use factory for TeamInvitation model
…ovements (#1339) * test: Add Docker Smoke Test Workflow * fix: add healthcheck in Dockerfile.worker * run smoke tests on frankenphp docker image * fix: worker Dockerfile healthcheck * build: smoke test for frankenphp additions run test coverage in dev and prod build workflows * fix: add heahthcheck in app Dockerfile * fix: copilot review changes
* test: Add Docker Smoke Test Workflow * fix: add healthcheck in Dockerfile.worker * run smoke tests on frankenphp docker image * fix: worker Dockerfile healthcheck * build: smoke test for frankenphp additions run test coverage in dev and prod build workflows * fix: add heahthcheck in app Dockerfile * fix: copilot review changes * fix: update healthcheck endpoint for app
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