Merge branch 'main' into NIAD-1136

Author: chiaramapellimt

service/src/test/java/uk/nhs/adaptors/gp2gp/ehr/mapper/ConditionLinkSetMapperTest.java

@@ -79,20 +79,20 @@ void setUp() {
         final InputBundle inputBundle = new InputBundle(bundle);
 
         when(messageContext.getIdMapper())
-                .thenReturn(idMapper);
+            .thenReturn(idMapper);
         when(messageContext.getInputBundleHolder())
-                .thenReturn(inputBundle);
+            .thenReturn(inputBundle);
         when(idMapper.getOrNew(ResourceType.Condition, conditionId))
-                .thenReturn(CONDITION_ID);
+            .thenReturn(CONDITION_ID);
         when(idMapper.getOrNew(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
 
         conditionLinkSetMapper = new ConditionLinkSetMapper(
-                messageContext,
-                randomIdGeneratorService,
-                codeableConceptCdMapper,
-                participantMapper,
-                confidentialityService
+            messageContext,
+            randomIdGeneratorService,
+            codeableConceptCdMapper,
+            participantMapper,
+            confidentialityService
         );
     }
 
@@ -103,26 +103,26 @@ void afterEach() {
 
     private void initializeNullFlavorCodeableConceptMocks() {
         when(codeableConceptCdMapper.mapCodeableConceptToCd(any(CodeableConcept.class)))
-                .thenReturn(NULL_FLAVOR_CODE);
+            .thenReturn(NULL_FLAVOR_CODE);
     }
 
     private void initializeAgentDirectoryMocks() {
         when(messageContext.getAgentDirectory())
-                .thenReturn(agentDirectory);
+            .thenReturn(agentDirectory);
     }
 
     static Stream<Arguments> testArguments() {
         return Stream.of(
-                Arguments.of("condition_all_included.json", "expected_output_linkset_1.xml", true),
-                Arguments.of("condition_all_included.json", "expected_output_linkset_2.xml", false),
-                Arguments.of("condition_major_significance.json", "expected_output_linkset_6.xml", false),
-                Arguments.of("condition_related_clinical_content_list_reference.json", "expected_output_linkset_8.xml", false),
-                Arguments.of("condition_related_clinical_content_suppressed_linkage_references.json", "expected_output_linkset_9.xml", false),
-                Arguments.of("condition_2_related_clinical_content.json", "expected_output_linkset_10.xml", false),
-                Arguments.of("condition_status_active.json", "expected_output_linkset_11.xml", false),
-                Arguments.of("condition_status_inactive.json", "expected_output_linkset_12.xml", false),
-                Arguments.of("condition_dates_present.json", "expected_output_linkset_13.xml", false),
-                Arguments.of("condition_dates_not_present.json", "expected_output_linkset_14.xml", false)
+            Arguments.of("condition_all_included.json", "expected_output_linkset_1.xml", true),
+            Arguments.of("condition_all_included.json", "expected_output_linkset_2.xml", false),
+            Arguments.of("condition_major_significance.json", "expected_output_linkset_6.xml", false),
+            Arguments.of("condition_related_clinical_content_list_reference.json", "expected_output_linkset_8.xml", false),
+            Arguments.of("condition_related_clinical_content_suppressed_linkage_references.json", "expected_output_linkset_9.xml", false),
+            Arguments.of("condition_2_related_clinical_content.json", "expected_output_linkset_10.xml", false),
+            Arguments.of("condition_status_active.json", "expected_output_linkset_11.xml", false),
+            Arguments.of("condition_status_inactive.json", "expected_output_linkset_12.xml", false),
+            Arguments.of("condition_dates_present.json", "expected_output_linkset_13.xml", false),
+            Arguments.of("condition_dates_not_present.json", "expected_output_linkset_14.xml", false)
         );
     }
 
@@ -135,7 +135,7 @@ void When_MappingParsedCondition_With_RealProblem_Expect_LinkSetXml(String condi
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, isNested);
 
@@ -144,29 +144,29 @@ void When_MappingParsedCondition_With_RealProblem_Expect_LinkSetXml(String condi
 
     private static Stream<Arguments> testObservationArguments() {
         return Stream.of(
-                Arguments.of("condition_no_problem.json", "expected_output_linkset_3.xml", true),
-                Arguments.of("condition_actual_problem_condition.json", "expected_output_linkset_5.xml", false),
-                Arguments.of("condition_no_problem_no_onsetdate.json", "expected_output_linkset_18.xml", true),
-                Arguments.of("condition_related_clinical_content_allergy.json", "expected_output_linkset_19.xml", false)
+            Arguments.of("condition_no_problem.json", "expected_output_linkset_3.xml", true),
+            Arguments.of("condition_actual_problem_condition.json", "expected_output_linkset_5.xml", false),
+            Arguments.of("condition_no_problem_no_onsetdate.json", "expected_output_linkset_18.xml", true),
+            Arguments.of("condition_related_clinical_content_allergy.json", "expected_output_linkset_19.xml", false)
         );
     }
 
     @ParameterizedTest
     @MethodSource("testObservationArguments")
     void When_MappingParsedCondition_With_ObservationActualProblem_Expect_LinkSetXml(
-            String conditionJson,
-            String outputXml,
-            boolean isNested
+        String conditionJson,
+        String outputXml,
+        boolean isNested
     ) {
         final Condition condition = getConditionResourceFromJson(conditionJson);
         final String expectedXml = getXmlStringFromFile(outputXml);
 
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
         when(randomIdGeneratorService.createNewId())
-                .thenReturn(GENERATED_ID);
+            .thenReturn(GENERATED_ID);
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, isNested);
 
@@ -181,10 +181,10 @@ void When_MappingParsedConditionWithoutMappedAgent_Expect_EhrMapperException() {
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenThrow(propagatedException);
+            .thenThrow(propagatedException);
 
         assertThatThrownBy(() -> conditionLinkSetMapper.mapConditionToLinkSet(condition, false))
-                .isEqualTo(propagatedException);
+            .isEqualTo(propagatedException);
     }
 
     @Test
@@ -195,8 +195,8 @@ void When_MappingParsedConditionWithAsserterNotPractitioner_Expect_EhrMapperExce
         initializeNullFlavorCodeableConceptMocks();
 
         assertThatThrownBy(() -> conditionLinkSetMapper.mapConditionToLinkSet(condition, false))
-                .isExactlyInstanceOf(EhrMapperException.class)
-                .hasMessage("Condition.asserter must be a Practitioner");
+            .isExactlyInstanceOf(EhrMapperException.class)
+            .hasMessage("Condition.asserter must be a Practitioner");
     }
 
     @Test
@@ -206,11 +206,11 @@ void When_MappingParsedCondition_With_ActualProblemImmunization_Expect_LinkSetXm
 
         initializeAgentDirectoryMocks();
         when(codeableConceptCdMapper.mapCodeableConceptToCdForTransformedActualProblemHeader(any(CodeableConcept.class)))
-                .thenReturn(TEST_CONDITION_CODE);
+            .thenReturn(TEST_CONDITION_CODE);
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
         when(randomIdGeneratorService.createNewId())
-                .thenReturn(GENERATED_ID);
+            .thenReturn(GENERATED_ID);
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, false);
 
@@ -224,11 +224,11 @@ void When_MappingParsedCondition_With_ActualProblemMedicationRequest_Expect_Link
 
         initializeAgentDirectoryMocks();
         when(codeableConceptCdMapper.mapCodeableConceptToCdForTransformedActualProblemHeader(any(CodeableConcept.class)))
-                .thenReturn(ACTUAL_PROBLEM_CODE);
+            .thenReturn(ACTUAL_PROBLEM_CODE);
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
         when(randomIdGeneratorService.createNewId())
-                .thenReturn(GENERATED_ID);
+            .thenReturn(GENERATED_ID);
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, false);
 
@@ -242,9 +242,9 @@ void When_MappingParsedCondition_With_AllergyIntolerance_Expect_LinkSetXml() {
 
         initializeAgentDirectoryMocks();
         when(codeableConceptCdMapper.mapCodeableConceptToCdForTransformedActualProblemHeader(any(CodeableConcept.class)))
-                .thenReturn(TEST_CONDITION_CODE);
+            .thenReturn(TEST_CONDITION_CODE);
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
         when(randomIdGeneratorService.createNewId())
                 .thenReturn(GENERATED_ID);
 
@@ -258,8 +258,8 @@ void When_MappingParsedConditionCodeIsMissing_Expect_MapperException() {
         final Condition condition = getConditionResourceFromJson("condition_missing_code.json");
 
         assertThatThrownBy(() -> conditionLinkSetMapper.mapConditionToLinkSet(condition, false))
-                .isExactlyInstanceOf(EhrMapperException.class)
-                .hasMessage("Condition code not present");
+            .isExactlyInstanceOf(EhrMapperException.class)
+            .hasMessage("Condition code not present");
     }
 
     @Test
@@ -270,7 +270,7 @@ void When_MappingParsedConditionWithNoRelatedClinicalContent_Expect_LinkSetXml()
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, false);
 
@@ -285,7 +285,7 @@ void When_MappingConditionWithSuppressedMedicationRequestAsRelatedClinicalConten
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(agentDirectory.getAgentId(any(Reference.class)))
-                .thenAnswer(answerWithId());
+            .thenAnswer(answerWithId());
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, false);
 
@@ -308,21 +308,21 @@ void When_MappingCondition_With_NopatMetaSecurity_Expect_ConfidentialityCodeInBo
         final Condition condition = getConditionResourceFromJson("condition_actual_problem_condition.json");
         final String linkSetXpath = "/Root/component[1]/LinkSet/" + ConfidentialityCodeUtility.getNopatConfidentialityCodeXpathSegment();
         final String observationStatementXpath = "/Root/component[2]/ObservationStatement/" + ConfidentialityCodeUtility
-                .getNopatConfidentialityCodeXpathSegment();
+            .getNopatConfidentialityCodeXpathSegment();
         ConfidentialityCodeUtility.appendNopatSecurityToMetaForResource(condition);
 
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(confidentialityService.generateConfidentialityCode(conditionArgumentCaptor.capture()))
-                .thenReturn(Optional.of(NOPAT_HL7_CONFIDENTIALITY_CODE));
+            .thenReturn(Optional.of(NOPAT_HL7_CONFIDENTIALITY_CODE));
 
         final String actualXml = wrapXmlInRootElement(conditionLinkSetMapper.mapConditionToLinkSet(condition, false));
         final String conditionSecurityCode = ConfidentialityCodeUtility.getSecurityCodeFromResource(conditionArgumentCaptor.getValue());
 
         assertAll(
-                () -> assertThatXml(actualXml).containsXPath(observationStatementXpath),
-                () -> assertThatXml(actualXml).containsXPath(linkSetXpath),
-                () -> assertThat(conditionSecurityCode).isEqualTo(NOPAT)
+            () -> assertThatXml(actualXml).containsXPath(observationStatementXpath),
+            () -> assertThatXml(actualXml).containsXPath(linkSetXpath),
+            () -> assertThat(conditionSecurityCode).isEqualTo(NOPAT)
         );
     }
 
@@ -334,14 +334,14 @@ void When_MappingCondition_With_NoScrubMetaSecurity_Expect_ConfidentialityCodeNo
         initializeAgentDirectoryMocks();
         initializeNullFlavorCodeableConceptMocks();
         when(confidentialityService.generateConfidentialityCode(conditionArgumentCaptor.capture()))
-                .thenReturn(Optional.empty());
+            .thenReturn(Optional.empty());
 
         final String actualXml = conditionLinkSetMapper.mapConditionToLinkSet(condition, false);
         final String conditionSecurityCode = ConfidentialityCodeUtility.getSecurityCodeFromResource(conditionArgumentCaptor.getValue());
 
         assertAll(
-                () -> assertThat(actualXml).doesNotContainIgnoringCase(NOPAT_HL7_CONFIDENTIALITY_CODE),
-                () -> assertThat(conditionSecurityCode).isEqualTo(NOSCRUB)
+            () -> assertThat(actualXml).doesNotContainIgnoringCase(NOPAT_HL7_CONFIDENTIALITY_CODE),
+            () -> assertThat(conditionSecurityCode).isEqualTo(NOSCRUB)
         );
     }