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Mira Sohn
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documentation update - config-yaml
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docs/configuration/config-yaml.rst

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@@ -302,7 +302,7 @@ MACS specific parameters.
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``fasta`` field
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^^^^^^^^^^^^^^^
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string. A path to the ``fasta`` reference genome used to map sequencing reads.
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string. A path to the FASTA reference genome used to map sequencing reads.
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Cell Ranger users can specify ``fasta/genome.fa`` in the reference directory
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that was used to run ``cellranger-atac count`` or ``cellranger-arc count``.
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string, default ``"../reference/multiome.chromsizes"`` (Multiome) or
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``"../reference/atac.chromsizes"`` (ATAC). A path to the ``.chromsizes``
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file created from the ``fasta`` reference genome.
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file created from the FASTA reference genome.
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Example:
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