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| --- | ||
| title: "Open Neurodata and Tools Showcase 2025" | ||
| date: 2025-05-13 | ||
| endDate: 2025-05-13 | ||
| location: "Virtual" | ||
| eventType: "Showcase" | ||
| image: "/images/events/default-event-banner.png" | ||
| weight: 20250513 | ||
| summary: "A free virtual event showcasing publicly available neurophysiology datasets in DANDI and open-source tools integrated with the NWB ecosystem." | ||
| draft: false | ||
| organizers: | ||
| - "Alessandra Trapani" | ||
| - "Stephanie Prince" | ||
| - "Benjamin Dichter" | ||
| - "Oliver Rübel" | ||
| - "Ryan Ly" | ||
| registration: "Register as an attendee [here](https://forms.gle/rj8gYB92guBMcQZN7) or as a presenter [here](https://forms.gle/UQugCAUJqL4jabrR9)." | ||
| resources: | ||
| "Event Page": "https://neurodatawithoutborders.github.io/nwb_hackathons/HCK23_2025_OpenNeurodataShowcase/" | ||
| "DANDI Archive": "https://dandiarchive.org" | ||
| "Data Conversion Workshop": "https://neurodatawithoutborders.github.io/nwb_hackathons/HCK22_2025_DataConversion_Remote/" | ||
| --- | ||
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| ## Dates and Location | ||
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| - **Date:** May 13, 2025, 9:10 - 10:40 AM PDT (UTC-7) | ||
| - **Location:** Virtual in Gather (link will be shared with registrants) | ||
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| ## Overview | ||
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| [The DANDI Archive](http://dandiarchive.org) now has 300+ neurophysiology datasets in the [Neurodata Without Borders](http://nwb.org) format spanning many species, brain areas, task types, and imaging modalities. These include datasets from [Allen Institute OpenScope](https://dandiarchive.org/dandiset/search?search=openscope), the [MICrONS project](https://dandiarchive.org/dandiset/000402), and the [International Brain Laboratory Brain Wide Map](https://dandiarchive.org/dandiset/000409), as well as diverse contributions from neuroscience labs around the world. | ||
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| The Open Neurodata and Tools Showcase is a free virtual event in Gather where attendees can meet data contributors and tool developers, explore publicly available neurophysiology datasets in DANDI, and discover open-source tools integrated with the NWB ecosystem. This event provides an opportunity to connect with both dataset creators and tool developers to discuss their work, including open research questions and potential applications. | ||
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| ## Target Audience | ||
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| This virtual event is open to anyone interested in neurophysiology data and tools, including but not limited to: | ||
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| - Neuroscience graduate students, post-docs, and other researchers interested in using open data and open-source tools in their research | ||
| - Educators who want to use real datasets in their lessons | ||
| - Undergraduates and high school students interested in learning about neuroscience software and data | ||
| - Open science advocates | ||
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| ## Agenda | ||
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| **Virtual Data Showcase Schedule (May 13, 2025):** | ||
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| | Time (Pacific) | Session | Speakers | | ||
| |---------------|---------|----------| | ||
| | 8:55 AM | Gather space opens to participants | | | ||
| | 9:00-9:10 AM | Introduction to the data and tools showcase | Organizers | | ||
| | 9:10-10:30 AM | Virtual poster session | Data Contributors and Tool Developers | | ||
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| ## Registration | ||
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| - If you are interested in **attending** the event, register using the attendee registration link above. | ||
| - If you are interested in **presenting** a dandiset or tool, register as a presenter using the presenter registration link above. | ||
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| ## Related Events | ||
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| The Neurodata and Tools Showcase is also part of a multi-day NWB Data Conversion workshop. If you are interested in attending these additional sessions to learn more about converting your own data to NWB and publishing on DANDI, please see the [Data Conversion Workshop page](https://neurodatawithoutborders.github.io/nwb_hackathons/HCK22_2025_DataConversion_Remote/) for more details. | ||
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| ## Organizing Committee | ||
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| - Alessandra Trapani, CatalystNeuro | ||
| - Stephanie Prince, Lawrence Berkeley National Laboratory | ||
| - Benjamin Dichter, CatalystNeuro | ||
| - Oliver Rübel, Lawrence Berkeley National Laboratory | ||
| - Ryan Ly, Lawrence Berkeley National Laboratory | ||
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| ## Code of Conduct | ||
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| Please see the [Code of Conduct](https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct) for all NWB events. | ||
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| --- | ||
| title: "NWB Community Hackathon at Flatiron Institute" | ||
| date: 2025-08-04 | ||
| endDate: 2025-08-06 | ||
| location: "Flatiron Institute, New York, NY" | ||
| eventType: "Hackathon" | ||
| image: "/images/events/default-event-banner.png" | ||
| weight: 20250804 | ||
| summary: "The first NWB hackathon hosted by the Flatiron Institute, bringing together scientists, research software engineers, and students to work on NWB development, tool integration, outreach, and training." | ||
| draft: false | ||
| organizers: | ||
| - "Ryan Ly" | ||
| - "Matthew Avalyon" | ||
| registration: "Register for the event [here](https://docs.google.com/forms/d/e/1FAIpQLScGO7ljpLWACStymeJU4wBSgNhNCyUN4H5xfQN32M_8qMriBg/viewform?usp=dialog)." | ||
| resources: | ||
| "Event Page": "https://neurodatawithoutborders.github.io/nwb_hackathons/HCK25_2025_Community_Hackathon_Flatiron/" | ||
| "Code of Conduct": "https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct" | ||
| --- | ||
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| ## Dates and Location | ||
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| - **Dates:** Monday, August 4, 2025, 9 AM to Wednesday, August 6, 2025, 5:30 PM | ||
| - **Location:** Flatiron Institute, [162 5th Ave, New York, NY 10010, USA](https://www.google.com/maps/place/Flatiron+Institute/data=!4m2!3m1!1s0x0:0x8849799a20fe5d4a?sa=X&ved=1t:2428&ictx=111) | ||
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| ## Overview | ||
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| The Neurodata Without Borders (NWB) team is organizing a community hackathon to bring together scientists, research software engineers, and students who want to become involved with NWB development, tool integration, outreach, and/or training by hacking on projects together. This hackathon will enable participants to work intensively on NWB-related projects with the assistance of the NWB development team and others in the community. | ||
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| This is the first NWB hackathon event hosted by the Flatiron Institute, which is home to active projects in the NWB software ecosystem, such as Pynapple, NeMoS, Neurosift, and CaImAn. Hackathon projects can be on any topic, but projects that relate to NWB integration with these tools are encouraged. | ||
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| ## Objective | ||
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| The Neurodata Without Borders project is an effort to standardize the description and storage of neurophysiology data and metadata. NWB enables data sharing and reuse and reduces the energy barrier to applying data analytics both within and across labs. NWB has seen wide adoption in the neurophysiology community, and there are now over 300 datasets on the DANDI Archive in NWB, including data from the Allen Institute and the International Brain Laboratory. | ||
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| The NWB Community Hackathon will bring neuroscientists, tool builders, and research software engineers together to further the development of the NWB software ecosystem, including the data standard, core software packages, official tools, and community tools. Members of the community will exchange ideas and best practices for using NWB and the libraries, share NWB-based tools, surface common needs, solve bugs, make feature requests, brainstorm about future funding and collaboration, and make progress on current blockages. | ||
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| ## Important Notes | ||
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| - This community hackathon is not a training event. There will be no introductory-level talks or lessons on how to use NWB. | ||
| - If you are new to NWB but still interested in attending, the NWB team provides many [video tutorials](https://www.youtube.com/watch?v=xZiSesEVA3o&list=PL5wPNhoBP0ZB2sLuRKWqwgXf9V3FRl1bw) and [online documentation](https://nwb-overview.readthedocs.io/en/latest/intro_to_nwb/1_intro_to_nwb.html). | ||
| - If you want to learn how to convert your data to NWB, consider attending the [virtual NWB Data Conversion Workshop](https://neurodatawithoutborders.github.io/nwb_hackathons/HCK22_2025_DataConversion_Remote/) in May 2025. | ||
| - We encourage participants to stay at the hackathon until the very end - Wednesday at 5:30 PM - to participate in the final project presentations. | ||
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| ## Logistics | ||
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| ### Housing | ||
| Housing support is not provided. Housing options near the hackathon will be suggested in April. | ||
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| ### Travel | ||
| Travel support is not provided. | ||
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| ### Dining | ||
| Continental breakfast and boxed lunches will be provided, courtesy of the Simons Foundation. | ||
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| ## Organizing Committee | ||
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| - **Program chairs:** Ryan Ly and Matthew Avalyon | ||
| - **Site Chair:** To be determined | ||
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| ## Code of Conduct | ||
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| Please see the [Code of Conduct](https://neurodatawithoutborders.github.io/nwb_hackathons/code_of_conduct) for all NWB events. | ||
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| --- | ||
| title: "NWB and DANDI Workshop at NYU" | ||
| date: 2025-08-07 | ||
| endDate: 2025-08-07 | ||
| location: "NYU Langone Health Science Building, New York, NY" | ||
| eventType: "Workshop" | ||
| image: "/images/events/default-event-banner.png" | ||
| weight: 20250807 | ||
| summary: "An interactive workshop on Neurodata Without Borders (NWB) and the DANDI Archive, teaching how to use these resources to maximize the impact of your data and integrate publicly available datasets into your research." | ||
| draft: false | ||
| organizers: | ||
| - "Neuroscience Institute at NYU Langone Health" | ||
| registration: "Register for the event [here](https://forms.gle/YpgasNndE9kXYBKG7)." | ||
| resources: | ||
| "Event Page": "https://neurodatawithoutborders.github.io/nwb_hackathons/Workshop_2025_NYU/" | ||
| "NWB Overview": "https://nwb.org" | ||
| "DANDI Archive": "https://dandiarchive.org" | ||
| --- | ||
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| ## Dates and Location | ||
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| - **Date:** August 7, 2025 | ||
| - **Location:** NYU Langone Health Science Building, 435 E 30th St, New York, NY | ||
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| ## Overview | ||
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| Join us for an interactive workshop on [Neurodata Without Borders (NWB)](https://nwb.org), a data standard for neurophysiology, and the [DANDI Archive](https://dandiarchive.org), a collaboration platform for publishing, sharing, and processing neurophysiology data. | ||
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| Learn how to use these resources to maximize the impact of your data and integrate some of the 350+ publicly available datasets into your research. Representatives from the NWB and DANDI teams will provide an overview of the NWB software ecosystem and teach you how to convert data to NWB and publish data on DANDI. | ||
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| ## Target Audience | ||
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| This workshop is designed for neuroscience researchers at all career stages, from undergraduate students working in labs to graduate students, post-doctoral researchers, and principal investigators. No prior programming experience is required. | ||
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| ## Agenda | ||
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| ### Morning Session (9:00am – 12:30pm): Lectures and Interactive Tutorials | ||
| **Location: Science Building 103** | ||
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| - **9:00am – 9:45am:** Introduction to NWB and DANDI | ||
| - **10:00am – 11:00am:** Standardizing and publishing data | ||
| - **11:15am – 12:15pm:** Integrating existing data into your science | ||
| - **12:15pm – 12:30pm:** Q+A and discussion about open data | ||
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| ### Afternoon Session (1:30pm – 5:00pm): Hands-on Bring Your Own Data Session | ||
| **Location: Science Building 1220** | ||
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| - **1:30pm – 5:00pm:** NWB developers available for 1:1 support for data conversion and reuse | ||
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| ## Registration | ||
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| This event is free and open to all. To ensure building access, please register in advance using the link above. |
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The table display is a little hard to read because there are no lines dividing the cells, I think it's ok but not sure if there is a easy fix