Skip to content

Conversation

@alejoe91
Copy link
Contributor

Fixes the following error when x column is not present:

---------------------------------------------------------------------------
AttributeError                            Traceback (most recent call last)
File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/ipywidgets/widgets/widget.py:766, in Widget._handle_msg(self, msg)
    764         if 'buffer_paths' in data:
    765             _put_buffers(state, data['buffer_paths'], msg['buffers'])
--> 766         self.set_state(state)
    768 # Handle a state request.
    769 elif method == 'request_state':

File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/ipywidgets/widgets/widget.py:648, in Widget.set_state(self, sync_data)
    645 if name in self.keys:
    646     from_json = self.trait_metadata(name, 'from_json',
    647                                     self._trait_from_json)
--> 648     self.set_trait(name, from_json(sync_data[name], self))

File ~/anaconda3/envs/nwb/lib/python3.9/contextlib.py:126, in _GeneratorContextManager.__exit__(self, typ, value, traceback)
    124 if typ is None:
    125     try:
--> 126         next(self.gen)
    127     except StopIteration:
    128         return False

File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/traitlets/traitlets.py:1498, in HasTraits.hold_trait_notifications(self)
   1496 for changes in cache.values():
   1497     for change in changes:
-> 1498         self.notify_change(change)

File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/ipywidgets/widgets/widget.py:694, in Widget.notify_change(self, change)
    691     if name in self.keys and self._should_send_property(name, getattr(self, name)):
    692         # Send new state to front-end
    693         self.send_state(key=name)
--> 694 super().notify_change(change)

File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/traitlets/traitlets.py:1513, in HasTraits.notify_change(self, change)
   1511 def notify_change(self, change):
   1512     """Notify observers of a change event"""
-> 1513     return self._notify_observers(change)

File ~/anaconda3/envs/nwb/lib/python3.9/site-packages/traitlets/traitlets.py:1560, in HasTraits._notify_observers(self, event)
   1557 elif isinstance(c, EventHandler) and c.name is not None:
   1558     c = getattr(self, c.name)
-> 1560 c(event)

File ~/Documents/codes/catalystneuro/nwbwidgets/nwbwidgets/base.py:157, in lazy_tabs.<locals>.on_selected_index(change)
    155 def on_selected_index(change):
    156     if isinstance(change.owner.children[change.new], widgets.HTML):
--> 157         children[change.new] = vis2widget(tabs_spec[change.new][1](node))
    158         change.owner.children = children

File ~/Documents/codes/catalystneuro/nwbwidgets/nwbwidgets/view.py:33, in show_dynamic_table(node, **kwargs)
     31 def show_dynamic_table(node, **kwargs) -> widgets.Widget:
     32     if node.name == "electrodes":
---> 33         return ecephys.show_electrodes(node)
     34     return base.render_dataframe(node)

File ~/Documents/codes/catalystneuro/nwbwidgets/nwbwidgets/ecephys.py:88, in show_electrodes(electrodes_table)
     86 def show_electrodes(electrodes_table):
     87     in_dict = dict(table=render_dataframe)
---> 88     if np.isnan(electrodes_table.x[0]):  # position is not defined
     89         in_dict.update(electrode_groups=ElectrodeGroupsWidget)
     90     else:

AttributeError: 'DynamicTable' object has no attribute 'x'

@codecov
Copy link

codecov bot commented Dec 21, 2022

Codecov Report

Merging #253 (df43742) into master (b20588b) will decrease coverage by 0.05%.
The diff coverage is 0.00%.

@@            Coverage Diff             @@
##           master     #253      +/-   ##
==========================================
- Coverage   66.60%   66.55%   -0.06%     
==========================================
  Files          35       35              
  Lines        3441     3444       +3     
==========================================
  Hits         2292     2292              
- Misses       1149     1152       +3     
Flag Coverage Δ
unittests 66.55% <0.00%> (-0.06%) ⬇️

Flags with carried forward coverage won't be shown. Click here to find out more.

Impacted Files Coverage Δ
nwbwidgets/ecephys.py 57.69% <0.00%> (-1.72%) ⬇️

📣 We’re building smart automated test selection to slash your CI/CD build times. Learn more

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment

Labels

None yet

Projects

None yet

Development

Successfully merging this pull request may close these issues.

2 participants