fixing the github build path

application/nrconsole/.classpath

@@ -6,12 +6,10 @@
 		</attributes>
 	</classpathentry>
 	<classpathentry kind="src" path="jMonkeySource"/>
-	<classpathentry kind="src" path="github-api"/>
 	<classpathentry kind="lib" path="lib/miglayout-3.7.2-swing.jar"/>
 	<classpathentry kind="lib" path="lib/jcommon-1.0.16.jar"/>
 	<classpathentry kind="lib" path="lib/jfreechart-1.0.13.jar"/>
 	<classpathentry kind="lib" path="lib/jxl.jar"/>
-	<classpathentry kind="lib" path="/NRSDK/lib_addons/smack.jar"/>
 	<classpathentry kind="con" path="org.dyno.visual.swing.VS_LIBRARY/layoutext"/>
 	<classpathentry kind="lib" path="lib/eventbus.jar"/>
 	<classpathentry kind="lib" path="lib/gluegen-rt.jar"/>
@@ -45,8 +43,6 @@
 	<classpathentry kind="lib" path="lib/stack-alloc.jar"/>
 	<classpathentry kind="lib" path="lib/vecmath.jar"/>
 	<classpathentry kind="lib" path="lib/xmlpull-xpp3.jar"/>
-	<classpathentry combineaccessrules="false" kind="src" path="/NRSDK"/>
-	<classpathentry kind="lib" path="/NRSDK/lib_addons/smackx.jar"/>
 	<classpathentry kind="lib" path="lib/mp3plugin.jar"/>
 	<classpathentry kind="lib" path="lib/groovy-2.3.7.jar"/>
 	<classpathentry kind="con" path="org.eclipse.jdt.launching.JRE_CONTAINER"/>
@@ -58,5 +54,15 @@
 	<classpathentry kind="lib" path="lib/okhttp-urlconnection-1.6.0.jar"/>
 	<classpathentry kind="lib" path="lib/jackson-annotations-2.5.1.jar"/>
 	<classpathentry kind="lib" path="lib/jackson-core-2.5.1.jar"/>
+	<classpathentry kind="lib" path="lib/richtextfx-0.6.jar"/>
+	<classpathentry kind="lib" path="lib/reactfx-2.0-M2u1.jar"/>
+	<classpathentry kind="lib" path="lib/controlsfx-8.0.6.jar"/>
+	<classpathentry kind="lib" path="lib/easybind-1.0.3.jar"/>
+	<classpathentry kind="lib" path="lib/flowless-0.4.jar"/>
+	<classpathentry kind="lib" path="lib/undofx-1.1.jar"/>
+	<classpathentry kind="lib" path="lib/wellbehavedfx-0.1.jar"/>
+	<classpathentry kind="lib" path="/java-bowler-git/libs/smack.jar"/>
+	<classpathentry kind="lib" path="/java-bowler-git/libs/smackx.jar"/>
+	<classpathentry combineaccessrules="false" kind="src" path="/java-bowler-git"/>
 	<classpathentry kind="output" path="bin"/>
 </classpath>

application/nrconsole/DigitalInputExampleSimple.java

@@ -0,0 +1,7 @@
+//Create a digital input object
+DigitalInputChannel dig = new DigitalInputChannel(dyio.getChannel(0));
+//Loop forever printing out the state of the button
+while(true){
+	System.out.println(dig.isHigh());
+	Thread.sleep(1000);
+}

application/nrconsole/lib/.gitignore

@@ -1,3 +1 @@
-/nrsdk-3.9.1-jar-with-dependencies.jar
-/nrsdk-3.10.0-jar-with-dependencies.jar
-/nrsdk-3.11.0-jar-with-dependencies.jar
+/nrsdk-*-jar-with-dependencies.jar

application/nrconsole/src/com/neuronrobotics/graphing/DataChannel.java

@@ -1,11 +1,14 @@
 package com.neuronrobotics.graphing;
 
+import javafx.application.Platform;
+
 import org.jfree.data.xy.XYSeries;
 
 public class DataChannel {
 	private String title;
 	private XYSeries series;
 	private static long startTime = System.currentTimeMillis();
+	private  long lastTime = System.currentTimeMillis();
 
 	public DataChannel(String title) {
 		this.title = title;
@@ -17,9 +20,23 @@ public String toString() {
 	}
 
 	public void graphValue(double value) {
-		long time = System.currentTimeMillis() - startTime ;
-		if(series != null)
-			series.add((double) time/1000, value);
+		if((lastTime+100)>System.currentTimeMillis())
+			return;
+		lastTime=	System.currentTimeMillis();
+//		try{
+//			Platform.runLater(()-> {
+//				long time = System.currentTimeMillis() - startTime ;
+//				if(series != null)
+//					series.add((double) time/1000, value);
+//				while(series.getItemCount()>3000){
+//					Platform.runLater(()-> {
+//						series.remove(0);
+//					});
+//				}
+//			});
+//		}catch(IllegalStateException ex){
+//			//application not yet loaded
+//		}
 	}
 
 	public XYSeries getSeries() {

application/nrconsole/src/com/neuronrobotics/graphing/DyIOGraphPlugin.java

@@ -11,7 +11,7 @@
 public class DyIOGraphPlugin extends AbstractNRConsoleTabedPanelPlugin {
 
 	public static final String[] myNames ={"neuronrobotics.dyio.*"};
-	private static final GraphingWindow gui =  new GraphingWindow();
+	private final GraphingWindow gui =  new GraphingWindow();
 	public DyIOGraphPlugin(PluginManager pm) {
 		this(myNames,pm);
 	}

application/nrconsole/src/com/neuronrobotics/graphing/GraphingWindow.java

@@ -161,7 +161,7 @@ private void setDefaultWindow() {
         axis.setAutoRange(true);
         axis.setFixedAutoRange(scale.getValue());  
         length.setText("" + scale.getValue());
-		invalidate();
+		//invalidate();
 		repaint();
 	}
 	private void setMovedWindow(double percent) {
@@ -177,8 +177,8 @@ private void setMovedWindow(double percent) {
         double sUpper =loc+(scale.getValue()/2);
         axis.setRange(sLower, sUpper);
         length.setText("" + scale.getValue());
-		invalidate();
-		repaint();
+		//invalidate();
+		//repaint();
 	}
 
 	public void addDataset(DataChannel data) {

application/nrconsole/src/com/neuronrobotics/nrconsole/MenuBar.java

@@ -209,6 +209,7 @@ void connect(){
 		}//clear any partial connection
 
 		connectionMenu.setEnabled(true);//Re-enable connection menu to allow access to menu items
+
 		manager.firePluginUpdate();
 	}
 
@@ -226,7 +227,7 @@ public void disconnect() {
 			ex.printStackTrace();
 		}
 		ThreadUtil.wait(75);
-		manager.firePluginUpdate();
+		//manager.firePluginUpdate();
 	}
 
 	/**

application/nrconsole/src/com/neuronrobotics/nrconsole/NRConsole.java

@@ -132,7 +132,7 @@ public void onPluginListUpdate(PluginManager m) {
 				//System.out.println("NRConsole is refreshing");
 				//new RuntimeException().printStackTrace();
 				if(nrcMenubar.isReady()){
-					System.out.println("Connection ready");
+					Log.debug("Connection ready");
 					SwingUtilities.invokeLater(() -> {
 						nrcMenubar.setMenues(manager.getMenueItems());
 						nrcFrame.setDeviceManager(manager);

application/nrconsole/src/com/neuronrobotics/nrconsole/NRConsoleWindow.java

@@ -81,10 +81,12 @@ public void ancestorResized(HierarchyEvent arg0) {
 			@Override
 			public void stateChanged(ChangeEvent e) {
 				try {
-					modePane.setMinimumSize(modePane.getSelectedComponent().getMinimumSize());
-					updateUI();
+					if(modePane != null){
+						modePane.setMinimumSize(modePane.getSelectedComponent().getMinimumSize());
+						updateUI();
+					}
 				} catch (Exception e2) {
-					e2.printStackTrace();
+					//e2.printStackTrace();
 				}
 
 
@@ -94,17 +96,17 @@ public void stateChanged(ChangeEvent e) {
 		logoPanel.add(new JLabel(logo),"[0,2]");
 		setIconImage( ConnectionImageIconFactory.getIcon("images/hat.png").getImage()); 
 		updateUI();
-		setSize(1050,1200);
+		setSize(1400, 1124);
 	}
 
 
-	public void repaint(){
-		logoPanel.repaint();
-		for(JPanel p: panels){
-			p.repaint();
-		}
-		super.repaint();
-	}
+//	public void repaint(){
+//		logoPanel.repaint();
+//		for(JPanel p: panels){
+//			p.repaint();
+//		}
+//		super.repaint();
+//	}
 	private void updateScroller(){
 		if(manager!=null)
 			scroller.setPreferredSize(getCurrentPanelMinSize());
@@ -121,11 +123,12 @@ private void updateUI(){
 //		}else {
 
 		//}
-
-		updateScroller();
 
-		invalidate();
-
+//		SwingUtilities.invokeLater(() -> {
+//			updateScroller();
+//			getContentPane().validate();
+//			getContentPane().repaint();
+//		});
 	}
 
 	public void setDeviceManager(PluginManager dm) {
@@ -136,6 +139,7 @@ public void setDeviceManager(PluginManager dm) {
 
 
 		manager.addIPluginUpdateListener(this);
+		manager.updateNamespaces();
 
 		Log.warning("Start Adding plugins ");
 		for(JPanel p: manager.getPanels()){

application/nrconsole/src/com/neuronrobotics/nrconsole/plugin/DyIO/DyIOPanel.java

@@ -83,7 +83,7 @@ public void actionPerformed(ActionEvent e) {
 			}
 		});
 	    int pr = Log.getMinimumPrintLevel();
-	    Log.enableInfoPrint();
+	    //Log.enableInfoPrint();
 	    //brownOutDetect.setSelected(DyIORegestry.get().isServoPowerSafeMode());
 	    Log.setMinimumPrintLevel(pr);
 	    brownOutDetect.addActionListener(new ActionListener() {

application/nrconsole/src/com/neuronrobotics/nrconsole/plugin/DyIO/NRConsoleDyIOPlugin.java

@@ -45,7 +45,7 @@ public class NRConsoleDyIOPlugin implements INRConsoleTabedPanelPlugin,IChannelP
 	private JMenuItem showSequencerConf = new JMenuItem("Show Sequencer Configuration");
 	private JMenuItem showPidConf = new JMenuItem("Show P.I.D. Configuration");
 	private JMenuItem showCloud = new JMenuItem("Show Cloud Computing Configuration");
-	private JMenuItem showGettingStarted = new JMenuItem("Getting Started");
+	//private JMenuItem showGettingStarted = new JMenuItem("Getting Started");
 	private JMenuItem graphOptionsMenuItem = new JMenuItem("Graphing Options");
 	private JMenuItem exportData = new JMenuItem("Export Data to File");
 	private boolean active=false;
@@ -105,7 +105,6 @@ public boolean setConnection(BowlerAbstractConnection connection){
 
 		DyIORegestry.setConnection(connection);
 		DyIORegestry.get().connect();
-
 		try {
 			DyIO.enableFWCheck();
 			DyIORegestry.get().checkFirmwareRev();
@@ -166,7 +165,7 @@ public boolean isAcvive() {
 
 	public ArrayList<JMenu> getMenueItems() {
 		JMenu collectionMenu = new JMenu("DyIO");
-		collectionMenu.add(showGettingStarted);
+		//collectionMenu.add(showGettingStarted);
 		//collectionMenu.add(showGraphMenuItem);
 		collectionMenu.add(exportData);
 		collectionMenu.add(showPidConf);
@@ -228,17 +227,17 @@ public void run() {
 				}.start();
 			}
 		});
-		showGettingStarted.addActionListener(new ActionListener() {	
-
-			public void actionPerformed(ActionEvent e) {		
-
-				INRConsoleTabedPanelPlugin p =new NRConsoleGettingStartedPlugin(manager);
-				p.setConnection(DyIORegestry.get().getConnection());
-				manager.firePluginUpdate();
-				showGettingStarted.setEnabled(false);
-
-			}
-		});
+//		showGettingStarted.addActionListener(new ActionListener() {	
+//			
+//			public void actionPerformed(ActionEvent e) {		
+//				
+//				INRConsoleTabedPanelPlugin p =new NRConsoleGettingStartedPlugin(manager);
+//				p.setConnection(DyIORegestry.get().getConnection());
+//				manager.firePluginUpdate();
+//				showGettingStarted.setEnabled(false);
+//				
+//			}
+//		});
 		showHexapodConf.addActionListener(new ActionListener() {	
 
 			public void actionPerformed(ActionEvent e) {		
@@ -401,6 +400,7 @@ public Dimension getMinimumWimdowDimentions() {
 
 	@Override
 	public void setActive(boolean b) {
+
 		if(active && DyIORegestry.get().isAvailable() && !b){
 			//DyIORegestry.get().killAllPidGroups();
 			for(int i =0;i<24;i++){