Add joss paper to main for 1.1.0 release

.github/workflows/CI.yml

@@ -19,7 +19,7 @@ jobs:
         cxx: ['g++']
         cmake_build_type: ['Release']
 
-    runs-on: ubuntu-20.04
+    runs-on: ubuntu-latest
     container:
       image: docker.io/openfoam/openfoam10-paraview510
       options: --user root
@@ -29,11 +29,8 @@ jobs:
       - name: Build AdditiveFOAM
         run: |
           . /opt/openfoam10/etc/bashrc
-          cd applications/solvers/additiveFoam/movingHeatSource
-          wmake libso
-          cd -
           cd applications/solvers/additiveFoam
-          wmake
+          ./Allwmake
       - name: Test AdditiveFOAM
         run: |
           . /opt/openfoam10/etc/bashrc

.github/workflows/draft-pdf.yml

@@ -0,0 +1,24 @@
+name: Draft PDF
+on: [push]
+
+jobs:
+  paper:
+    runs-on: ubuntu-latest
+    name: Paper Draft
+    steps:
+      - name: Checkout
+        uses: actions/checkout@v4
+      - name: Build draft PDF
+        uses: openjournals/openjournals-draft-action@master
+        with:
+          journal: joss
+          # This should be the path to the paper within your repo.
+          paper-path: doc/paper.md
+      - name: Upload
+        uses: actions/upload-artifact@v4
+        with:
+          name: paper
+          # This is the output path where Pandoc will write the compiled
+          # PDF. Note, this should be the same directory as the input
+          # paper.md
+          path: doc/paper.pdf

README.md

@@ -1,5 +1,12 @@
-# AdditiveFOAM
-AdditiveFOAM is a free, open source heat and mass transfer software for simulations of Additive Manufacturing (AM) released by Oak Ridge National Laboratory. It is built upon OpenFOAM, a free, open source computational fluid dynamics (CFD) software package released by the OpenFOAM Foundation.
+<img src="https://raw.githubusercontent.com/ORNL-MDF/additivefoam-website-assets/main/images/logo.png" alt="image" width="800">
+
+---
+`AdditiveFOAM` is a free, open source heat and mass transfer software for simulations of Additive Manufacturing (AM) released by Oak Ridge National Laboratory. It is built upon OpenFOAM, a free, open source computational fluid dynamics (CFD) software package released by the OpenFOAM Foundation.
+
+## Documentation
+[![Documentation Status][docs-badge]][docs-url]
+
+The documentation for `AdditiveFOAM` is hosted on [GitHub Pages](https://ornl.github.io/AdditiveFOAM/).
 
 ### Repository Features
 | Link                                                | Description                              |
@@ -8,11 +15,6 @@ AdditiveFOAM is a free, open source heat and mass transfer software for simulati
 | [utilities](applications/utilities)                       | Utilities for post-processing and code wrappers |
 | [tutorials](tutorials)                                     | Tutorial cases |
 
-## Documentation
-[![Documentation Status][docs-badge]][docs-url]
-
-The documentation for `AdditiveFOAM` is hosted on [GitHub Pages](https://ornl.github.io/AdditiveFOAM/).
-
 ## Installation and Dependencies
 [![OpenFOAM-10](https://img.shields.io/badge/OpenFOAM-10-blue.svg)](https://github.com/OpenFOAM/OpenFOAM-10)
 

applications/solvers/additiveFoam/Allwclean

@@ -0,0 +1,8 @@
+#!/bin/sh
+cd ${0%/*} || exit 1    # Run from this directory
+
+wclean libso functionObjects/ExaCA
+wclean libso movingHeatSource
+wclean
+
+#------------------------------------------------------------------------------

applications/solvers/additiveFoam/Allwmake

@@ -0,0 +1,11 @@
+#!/bin/sh
+cd ${0%/*} || exit 1    # Run from this directory
+
+# Parse arguments for library compilation
+. $WM_PROJECT_DIR/wmake/scripts/AllwmakeParseArguments
+
+wmake $targetType functionObjects/ExaCA
+wmake $targetType movingHeatSource
+wmake $targetType
+
+#------------------------------------------------------------------------------

applications/solvers/additiveFoam/Make/files

@@ -1,5 +1,5 @@
-BCs/mixedTemperature/mixedTemperatureFvPatchScalarField.C
-BCs/marangoni/marangoniFvPatchVectorField.C
+derivedFvPatchFields/mixedTemperature/mixedTemperatureFvPatchScalarField.C
+derivedFvPatchFields/marangoni/marangoniFvPatchVectorField.C
 
 additiveFoam.C
 

applications/solvers/additiveFoam/additiveFoam.C

@@ -38,10 +38,9 @@ Description
 #include "Polynomial.H"
 
 #include "interpolateXY/interpolateXY.H"
-
 #include "movingHeatSourceModel.H"
-#include "foamToExaCA/foamToExaCA.H"
 
+#include "EulerDdtScheme.H"
 #include "CrankNicolsonDdtScheme.H"
 
 // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@@ -65,8 +64,6 @@ int main(int argc, char *argv[])
 
     scalar alphaCoNum = 0.0;
 
-    foamToExaCA ExaCA(T);
-
     movingHeatSourceModel sources(mesh);
 
     // * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * * //
@@ -97,17 +94,13 @@ int main(int argc, char *argv[])
 
         #include "thermo/TEqn.H"
 
-        ExaCA.update();
-
         runTime.write();
 
         Info<< "ExecutionTime = " << runTime.elapsedCpuTime() << " s"
             << "  ClockTime = " << runTime.elapsedClockTime() << " s"
             << nl << endl;
     }
 
-    ExaCA.write();
-
     return 0;
 }
 

applications/solvers/additiveFoam/createFields.H

@@ -21,7 +21,7 @@ volScalarField alpha3
         runTime.timeName(),
         mesh,
         IOobject::READ_IF_PRESENT,
-        IOobject::NO_WRITE
+        IOobject::AUTO_WRITE
     ),
     mesh,
     dimensionedScalar("alpha.powder", dimless, 0.0),