dabuild

dabuild provides your analysis with genome build metadata.

Example

Use GRCh38.p13 build (Homo sapiens):

use dabuild::{GenomeBuild, GenomeBuildIdentifier};
use dabuild::builds::get_grch38_p13;

// Load the build
let build: GenomeBuild = get_grch38_p13();

// Check the basic credentials, such as major assembly and patch version
assert_eq!(build.id().major_assembly(), "GRCh38");
assert_eq!(build.id().patch(), Some("p13"));

// Obtain a contig (e.g. `chrY`) by name ...
let y = build.contig_by_name("Y");
assert!(y.is_some());

/// ... or by the GenBank accession ...
let y = build.contig_by_name("CM000686.2");
assert!(y.is_some());

/// ... or by the RefSeq accession ...
let y = build.contig_by_name("NC_000024.10");
assert!(y.is_some());

/// ... or by the UCSC identifier.
let y = build.contig_by_name("chrY");
assert!(y.is_some());

Documentation

See more examples along with the complete documentation at docs.rs.