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phenosentry

A Python package for ensuring data quality in phenopackets and collections of phenopackets.

Features

  • Validate phenopacket with quality checks

Installation

Install with Poetry:

poetry add phenosentry

or with pip:

pip install phenosentry

Usage

Phenosentry can be used as a library.

See example.py for an example usage.

Development

Run tests with:

poetry run pytest

Format the code with:

poetry run ruff format

Run linting with:

poetry run ruff check phenosentry

License

MIT License

About

A python package that ensures data quality for a phenopacket or collection of phenopackets.

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