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Problem.add_parameter: Rename kwarg estimated->estimate #348

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Merged
dweindl merged 3 commits into from
Dec 19, 2024
Merged

Problem.add_parameter: Rename kwarg estimated->estimate #348

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Problem.add_parameter: Rename kwarg estimated->estimate
dweindl Dec 18, 2024
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dweindl Dec 19, 2024
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dweindl Dec 19, 2024
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10 changes: 4 additions & 6 deletions petab/v1/problem.py
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Original file line number Diff line number Diff line change
Expand Up @@ -1074,7 +1074,7 @@ def add_observable(
def add_parameter(
self,
id_: str,
estimated: bool | str | int = True,
estimate: bool | str | int = True,
nominal_value=None,
scale: str = None,
lb: Number = None,
Expand All @@ -1089,7 +1089,7 @@ def add_parameter(

Arguments:
id_: The parameter id
estimated: Whether the parameter is estimated
estimate: Whether the parameter is estimated
nominal_value: The nominal value of the parameter
scale: The parameter scale
lb: The lower bound of the parameter
Expand All @@ -1104,11 +1104,9 @@ def add_parameter(
record = {
PARAMETER_ID: [id_],
}
if estimated is not None:
if estimate is not None:
record[ESTIMATE] = [
int(estimated)
if isinstance(estimated, bool | int)
else estimated
int(estimate) if isinstance(estimate, bool | int) else estimate
]
if nominal_value is not None:
record[NOMINAL_VALUE] = [nominal_value]
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10 changes: 4 additions & 6 deletions petab/v2/problem.py
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Original file line number Diff line number Diff line change
Expand Up @@ -829,7 +829,7 @@ def add_observable(
def add_parameter(
self,
id_: str,
estimated: bool | str | int = True,
estimate: bool | str | int = True,
nominal_value=None,
scale: str = None,
lb: Number = None,
Expand All @@ -844,7 +844,7 @@ def add_parameter(

Arguments:
id_: The parameter id
estimated: Whether the parameter is estimated
estimate: Whether the parameter is estimated
nominal_value: The nominal value of the parameter
scale: The parameter scale
lb: The lower bound of the parameter
Expand All @@ -859,11 +859,9 @@ def add_parameter(
record = {
PARAMETER_ID: [id_],
}
if estimated is not None:
if estimate is not None:
record[ESTIMATE] = [
int(estimated)
if isinstance(estimated, bool | int)
else estimated
int(estimate) if isinstance(estimate, bool | int) else estimate
]
if nominal_value is not None:
record[NOMINAL_VALUE] = [nominal_value]
Expand Down
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