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Write <code>genes</code> to output JSON

Status: Open.

#69 In PacificBiosciences/paraphase;

· fellen31 opened on Feb 20, 2026

Demo data run error--no coverage at region?

Status: Open.

#67 In PacificBiosciences/paraphase;

· wongmkc opened on Jan 16, 2026

can't create temp dir

Status: Open.

#66 In PacificBiosciences/paraphase;

· biolaocai opened on Jan 12, 2026

HBA

Status: Open.

#64 In PacificBiosciences/paraphase;

· Paranchai87 opened on Dec 18, 2025

OTOA haplotypes

Status: Open.

#63 In PacificBiosciences/paraphase;

· Paranchai87 opened on Dec 17, 2025

make min_read_support in get_candidate_pos a command params

Status: Open.

#61 In PacificBiosciences/paraphase;

· yangmqglobe opened on Dec 7, 2025

Missing recurrent CYP21A2 mutations in RCCX module and inconsistency in json file and vcf calls

Status: Open.

#60 In PacificBiosciences/paraphase;

· Paranchai87 opened on Nov 26, 2025

Use with ONT reads

Status: Open.

#40 In PacificBiosciences/paraphase;

· pabloangulo7 opened on Apr 25, 2025

Missing MM and ML Tags in Output BAM File from Paraphase (3.2.1)

Status: Open.

#36 In PacificBiosciences/paraphase;

· shubhambinf1987 opened on Feb 24, 2025

Exception: Two haplotypes are not equal length

Status: Open.

#13 In PacificBiosciences/paraphase;

· liukeweiaway opened on Dec 28, 2023