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Make plot helper compatible with Python 3.13 #549

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Merged
merged 4 commits into from
May 27, 2025
Merged

Make plot helper compatible with Python 3.13 #549

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9f4ee49
Making plot helper compatible with Python > 3.11
brownbaerchen Apr 28, 2025
e6d3890
Forgot to add a file
brownbaerchen Apr 28, 2025
fd7a328
Added pytest-isolate-mpi to firedrake tests
brownbaerchen May 5, 2025
e451bc7
Merge remote-tracking branch 'upstream/master' into python3.13
brownbaerchen May 27, 2025
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6 changes: 3 additions & 3 deletions pySDC/helpers/plot_helper.py
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
import matplotlib as mpl
import matplotlib.pyplot as plt
from distutils.spawn import find_executable
import shutil

default_mpl_params = mpl.rcParams.copy()

Expand Down Expand Up @@ -100,7 +100,7 @@ def setup_mpl(font_size=8, reset=False):

mpl.rcParams.update(style_options)

if find_executable('latex'):
if shutil.which('latex'):
latex_support = {
"pgf.texsystem": "pdflatex", # change this if using xetex or lautex
"text.usetex": True, # use LaTeX to write all text
Expand All @@ -125,7 +125,7 @@ def newfig(textwidth, scale, ratio=0.6180339887):


def savefig(filename, save_pdf=True, save_pgf=True, save_png=True):
if save_pgf and find_executable('latex'):
if save_pgf and shutil.which('latex'):
plt.savefig('{}.pgf'.format(filename), bbox_inches='tight')
if save_pdf:
plt.savefig('{}.pdf'.format(filename), bbox_inches='tight')
Expand Down
4 changes: 4 additions & 0 deletions pySDC/tests/test_benchmarks/test_collocation.py
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Expand Up @@ -25,6 +25,7 @@ def wrapper():
benchmark(wrapper)


@pytest.mark.base
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@brownbaerchen brownbaerchen May 5, 2025

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@tlunet, do you agree with this markers? I don't think we need to run these tests in all environments. They are throwing some numpy deprecation warnings at the moment, which we will need to deal with someday.

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@tlunet tlunet May 5, 2025 •
edited
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They are necessary. You just need to replace in the first assertion the == between arrays by some np.allclose (as the warning is suggesting ?)

EDIT : nvm, missread ...

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@tlunet tlunet May 5, 2025

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That's a polynomial deprecation warrning ?

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@brownbaerchen brownbaerchen May 5, 2025

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I didn't pay much attention to the warning, tbh. For now, I just want to run these tests only in the base environment and not in every environment.

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@tlunet tlunet May 5, 2025

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Oh, then that's fine indeed ... sorry I didn't realized that was an addition 😅

@pytest.mark.parametrize("node_type", node_types)
@pytest.mark.parametrize("quad_type", quad_types)
def test_canintegratepolynomials(node_type, quad_type):
Expand Down Expand Up @@ -61,6 +62,7 @@ def test_canintegratepolynomials(node_type, quad_type):
)


@pytest.mark.base
@pytest.mark.parametrize("node_type", node_types)
@pytest.mark.parametrize("quad_type", quad_types)
def test_relateQandSmat(node_type, quad_type):
Expand All @@ -82,6 +84,7 @@ def test_relateQandSmat(node_type, quad_type):
)


@pytest.mark.base
@pytest.mark.parametrize("node_type", node_types)
@pytest.mark.parametrize("quad_type", quad_types)
def test_partialquadraturewithQ(node_type, quad_type):
Expand All @@ -104,6 +107,7 @@ def test_partialquadraturewithQ(node_type, quad_type):
)


@pytest.mark.base
@pytest.mark.parametrize("node_type", node_types)
@pytest.mark.parametrize("quad_type", quad_types)
def test_partialquadraturewithS(node_type, quad_type):
Expand Down