Skip to content

Pardee-Lab-Computation-Group/plcg

Folders and files

NameName
Last commit message
Last commit date

Latest commit

 

History

18 Commits
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 
 

Repository files navigation

plcg

A package created by the Pardee Lab Computation Group containing a variety of python utilities which we have found useful in a variety of biology projects.

Software requirements:

Local Colabfold

Must be in path such that the user can call colabfold_batch from inside terminal in which you are running the project

pyrosetta

Should be installed into it's own environment as it is not yet supported in python 3.11, and thus we take the conda path as a function argument

Development model:

Workflows auto release new versions (Which are manually updated in setup.py)

  • Pushes to main release to pypi.
  • Pushes to test-pypi release to test-pypi.

General practice is that we make pr (or push directly) to test-pypi first, pull it into a real project to test, and then pr to main.

  • If you don't want to release, simply don't update version and workflows will fail harmlessly.
  • In the future we might update to only release when it finds the a change in setup.py version.

About

No description, website, or topics provided.

Resources

License

Stars

Watchers

Forks

Packages

No packages published

Languages