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Update sdcflows requirement from <=2.11.0 to <=2.12.0#498

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tsalo merged 2 commits intomainfrom
dependabot/pip/sdcflows-lte-2.12.0
Mar 31, 2025
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Update sdcflows requirement from <=2.11.0 to <=2.12.0#498
tsalo merged 2 commits intomainfrom
dependabot/pip/sdcflows-lte-2.12.0

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@dependabot dependabot bot commented on behalf of github Mar 24, 2025

Updates the requirements on sdcflows to permit the latest version.

Changelog

Sourced from sdcflows's changelog.

2.12.0 (March 21, 2025)

Feature release in the 2.12.x series.

This release migrates from the deprecated niworkflows.reporting module to the nireports package.

  • FIX: AttributeError for _ApplyCoeffsFieldInputSpec (#481)
  • ENH: Allow running SyN SDC without using prior (#480)
  • ENH: Allow estimated and fallback TotalReadoutTime (#477)
  • RF: Transition from niworkflows reporting interfaces (#473)
  • DOC: Fix broken link [skip ci] (#482)
  • MNT: Add defaults to conda channels in build-test-publish GHA (#474)
  • MNT: Update niworkflows version to 1.11.0 (#478)

2.11.0 (December 18, 2024)

Feature release in the 2.11.x series.

This release supports numpy 2 and Python 3.13.

  • FIX: Normalize BIDS-URIs to subject-relative (#458)
  • FIX: Only fit high-frequency spline for SyN-SDC (#457)
  • ENH: Allow Jacobian correction to be toggled on/off (#462)
  • ENH: Dilate fmap and bold masks during coregistration (#463)
  • TEST: Clear registry consistently to avoid order dependency (#464)
  • DOC: Plot correct workflow in init_syn_preprocessing_wf docstring (#460)
  • CI: Drop CircleCI, using GHA only (#459)

2.10.0 (July 04, 2024)

Feature release in the 2.10.x series.

The main change is a bugfix when fitting multi-level B-Splines to some noisy fieldmaps. The multi-level fitting, while being theoretically nice, does not really bring anything immediately as we are not generally inverting the distortion. In this release, the default fitting has been change to single-level B-Splines, with a spacing similar to TOPUP's defaults.

With thanks to Sunjae Shim (@​sjshim) for sharing Spiral-echo fieldmaps that were failing prior the patch in #453.

CHANGES

  • FIX: Revision of the B-Spline fitting code (#453)
  • FIX: Building Docker image on ARM64 devices (#449)

... (truncated)

Commits
  • 8d78b2f doc: 2.12.0 release notes
  • 6f55b53 fix: Address deprecation warning
  • f418243 fix: Use nireports-vendored svgutils library
  • 0fece05 chore(env): Compile PyPI dependencies, remove min-requirements
  • e1160d7 chore: Bump numpy to avoid setuptools rug-pull
  • cc5868c chore(env): Bring env.yml into line with fmriprep
  • eddad8f Merge pull request #482 from mgxd/doc/fmap-link
  • 479d55a DOC: Fix broken link [skip ci]
  • 647d690 Merge pull request #481 from HippocampusGirl/fix/nipype-xor-list
  • 9c1c0c0 test: Add doctest to ApplyCoeffsField
  • Additional commits viewable in compare view

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Updates the requirements on [sdcflows](https://github.com/nipreps/sdcflows) to permit the latest version.
- [Release notes](https://github.com/nipreps/sdcflows/releases)
- [Changelog](https://github.com/nipreps/sdcflows/blob/master/CHANGES.rst)
- [Commits](nipreps/sdcflows@0.0.1...2.12.0)

---
updated-dependencies:
- dependency-name: sdcflows
  dependency-type: direct:production
...

Signed-off-by: dependabot[bot] <support@github.com>
@dependabot dependabot bot added ignore-for-release PRs that shouldn't be included with release notes. maintenance Issues/PRs related to maintenance. Dependency versions, dependencies, etc. labels Mar 24, 2025
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codecov-commenter commented Mar 24, 2025

Codecov Report

All modified and coverable lines are covered by tests ✅

Project coverage is 83.79%. Comparing base (c6ab519) to head (7243128).
Report is 1 commits behind head on main.

Additional details and impacted files
@@           Coverage Diff           @@
##             main     #498   +/-   ##
=======================================
  Coverage   83.79%   83.79%           
=======================================
  Files          38       38           
  Lines        4017     4017           
=======================================
  Hits         3366     3366           
  Misses        651      651           

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tsalo commented Mar 31, 2025

@dependabot rebase

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dependabot bot commented on behalf of github Mar 31, 2025

Looks like this PR has been edited by someone other than Dependabot. That means Dependabot can't rebase it - sorry!

If you're happy for Dependabot to recreate it from scratch, overwriting any edits, you can request @dependabot recreate.

@tsalo tsalo merged commit 922ea85 into main Mar 31, 2025
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@tsalo tsalo deleted the dependabot/pip/sdcflows-lte-2.12.0 branch March 31, 2025 12:24
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