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50 changes: 23 additions & 27 deletions rustworkx-core/src/centrality.rs
Original file line number Diff line number Diff line change
Expand Up @@ -280,11 +280,11 @@ fn _accumulate_vertices<G>(
let mut delta = vec![0.0; max_index];
for w in &path_calc.verts_sorted_by_distance {
let iw = graph.to_index(*w);
let coeff = (1.0 + delta[iw]) / path_calc.sigma[w];
let p_w = path_calc.predecessors.get(w).unwrap();
for v in p_w {
let iv = graph.to_index(*v);
delta[iv] += path_calc.sigma[v] * coeff;
let coeff = (1.0 + delta[iw]) / path_calc.sigma[iw];
let p_w = path_calc.predecessors.get(iw).unwrap();
for iv in p_w {
//let iv = graph.to_index(*v);
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delta[*iv] += path_calc.sigma[*iv] * coeff;
}
}
let mut betweenness = locked_betweenness.write().unwrap();
Expand Down Expand Up @@ -342,43 +342,39 @@ where
<G as GraphBase>::NodeId: std::cmp::Eq + Hash,
{
verts_sorted_by_distance: Vec<G::NodeId>,
predecessors: HashMap<G::NodeId, Vec<G::NodeId>>,
sigma: HashMap<G::NodeId, f64>,
predecessors: Vec<Vec<usize>>,
sigma: Vec<f64>,
}

fn shortest_path_for_centrality<G>(graph: G, node_s: &G::NodeId) -> ShortestPathData<G>
where
G: NodeIndexable + IntoNodeIdentifiers + IntoNeighborsDirected + NodeCount + GraphBase,
<G as GraphBase>::NodeId: std::cmp::Eq + Hash,
{
let mut verts_sorted_by_distance: Vec<G::NodeId> = Vec::new(); // a stack
let c = graph.node_count();
let mut predecessors = HashMap::<G::NodeId, Vec<G::NodeId>>::with_capacity(c);
let mut sigma = HashMap::<G::NodeId, f64>::with_capacity(c);
let mut distance = HashMap::<G::NodeId, i64>::with_capacity(c);
let max_index = graph.node_bound();
let mut verts_sorted_by_distance: Vec<G::NodeId> = Vec::with_capacity(c); // a stack
let mut predecessors: Vec<Vec<usize>> = vec![Vec::new(); max_index];
let mut sigma: Vec<f64> = vec![0.; max_index];
let mut distance: Vec<i64> = vec![-1; max_index];
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A more appropriate type here is Option<i64> if you want to represent missing paths. I'd even say Option<usize>

#[allow(non_snake_case)]
let mut Q: VecDeque<G::NodeId> = VecDeque::with_capacity(c);

for node in graph.node_identifiers() {
predecessors.insert(node, Vec::new());
sigma.insert(node, 0.0);
distance.insert(node, -1);
}
Comment on lines -418 to -423
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Se how the hashmap was full filled with value for all node of the graph, so replacing with a vec of size of node bound will no be a problem for cache efficiency, because hashmap was already full when the algorithm started

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So I was not involved in the original review of #799. Your version is definetely better than what was submitted in #799. With that being said, I'd like to compare it to a more optimized version like in https://github.com/IvanIsCoding/rustworkx/blob/f9de1db7fd5f9efafe4d6f5d9012ae2c75364081/rustworkx-core/src/centrality.rs#L1137. But that can come in a follow up PR.

sigma.insert(*node_s, 1.0);
distance.insert(*node_s, 0);
let node_s_index = graph.to_index(*node_s);
sigma[node_s_index] = 1.0;
distance[node_s_index] = 0;
Q.push_back(*node_s);
while let Some(v) = Q.pop_front() {
verts_sorted_by_distance.push(v);
let distance_v = distance[&v];
let v_idx = graph.to_index(v);
let distance_v = distance[v_idx];
for w in graph.neighbors(v) {
if distance[&w] < 0 {
let w_idx = graph.to_index(w);
if distance[w_idx] < 0 {
Q.push_back(w);
distance.insert(w, distance_v + 1);
distance[w_idx] = distance_v + 1;
}
if distance[&w] == distance_v + 1 {
sigma.insert(w, sigma[&w] + sigma[&v]);
let e_p = predecessors.get_mut(&w).unwrap();
e_p.push(v);
if distance[w_idx] == distance_v + 1 {
sigma[w_idx] += sigma[v_idx];
predecessors[w_idx].push(v_idx);
}
}
}
Expand Down