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Improve 'unindex' field description in input_parsing.py (#129)
* Improve 'unindex' field description in input_parsing.py Updated the description for the 'unindex' field to clarify its purpose and usage. * Make format
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models/rfd3/src/rfd3/inference/input_parsing.py

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@@ -128,8 +128,10 @@ class DesignInputSpecification(BaseModel):
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# Motif selection from input file
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contig: Optional[InputSelection] = Field(None, description="Contig specification string (e.g. 'A1-10,B1-5')")
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unindex: Optional[InputSelection] = Field(None,
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description="Unindexed components string (components must not overlap with contig). "\
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"E.g. 'A15-20,B6-10' or dict. We recommend specifying")
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description="Unindexed components selection. Components to fix in the generated structure without specifying sequence index. "\
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"Components must not overlap with `contig` argument. "\
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"E.g. 'A15-20,B6-10' or dict. We recommend specifying unindexed residues as a contig string, "\
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"then using select_fixed_atoms will subset the atoms to the specified atoms")
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# Extra args:
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length: Optional[str] = Field(None, description="Length range as 'min-max' or int. Constrains length of contig if provided")
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ligand: Optional[str] = Field(None, description="Ligand name or index to include in design.")

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