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/usr/bin/ld: /opt/conda/envs/shapeworks/lib/libspdlog.so.1.15.3: undefined reference to `std::condition_variable::wait(std::unique_lock<std::mutex>&)@GLIBCXX_3.4.30'
ERROR: Could not find a version that satisfies the requirement itk-elastix==0.23.0 (from versions: 0.19.2, 0.20.0, 0.21.0) ERROR: No matching distribution found for itk-elastix==0.23.0
…r mac-intell. Not available.
2025-09-21T07:31:06.0673422Z python.exe found in: C:\Miniconda\envs\shapeworks 2025-09-21T07:31:06.0673897Z [2025-09-21 07:30:08.678] [info] Running Python File: python_embedded.py 2025-09-21T07:31:06.0674467Z unknown file: error: C++ exception with description "ImportError: Error importing numpy: you should not try to import numpy from 2025-09-21T07:31:06.0675041Z its source directory; please exit the numpy source tree, and relaunch 2025-09-21T07:31:06.0675371Z your python interpreter from there.
It works fine on native windows. There is something about Numpy > 2.0, embedded Python and GitHub Actions that is just becoming too time consuming to track down. I get this: 2025-09-22T23:30:50.0657400Z numpy.core.multiarray FAILED: ImportError: Error importing numpy: you should not try to import numpy from 2025-09-22T23:30:50.0658287Z its source directory; please exit the numpy source tree, and relaunch 2025-09-22T23:30:50.0658897Z your python interpreter from there. We are of course not in the numpy source dir, it's unable to load the DLL for multiarray for some reason.
…sk space for linux-debug on GHA anymore.
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Upgrade dependencies, most notably Python 3.12, pytorch 2.8.0 as well as others.
The linux build docker container is upgraded from ubuntu focal (20.04) to jammy (22.04)
This PR also enabled GitHub Actions dependency caching.