Merge pull request #1241 from sebapersson/readd_petab

TorkelE · web-flow · commit 91cf6398c5ba · 2025-04-18T12:25:04.000+02:00
Add PEtab.jl to the docs
diff --git a/Project.toml b/Project.toml
@@ -1,6 +1,6 @@
 name = "Catalyst"
 uuid = "479239e8-5488-4da2-87a7-35f2df7eef83"
-version = "15.0.0"
+version = "15.0.1"
 
 [deps]
 Combinatorics = "861a8166-3701-5b0c-9a16-15d98fcdc6aa"
diff --git a/docs/Project.toml b/docs/Project.toml
@@ -34,6 +34,7 @@ OrdinaryDiffEqRosenbrock = "43230ef6-c299-4910-a778-202eb28ce4ce"
 OrdinaryDiffEqSDIRK = "2d112036-d095-4a1e-ab9a-08536f3ecdbf"
 OrdinaryDiffEqTsit5 = "b1df2697-797e-41e3-8120-5422d3b24e4a"
 OrdinaryDiffEqVerner = "79d7bb75-1356-48c1-b8c0-6832512096c2"
+PEtab = "48d54b35-e43e-4a66-a5a1-dde6b987cf69"
 Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80"
 QuasiMonteCarlo = "8a4e6c94-4038-4cdc-81c3-7e6ffdb2a71b"
 SciMLBase = "0bca4576-84f4-4d90-8ffe-ffa030f20462"
@@ -80,6 +81,7 @@ OrdinaryDiffEqRosenbrock = "1"
 OrdinaryDiffEqSDIRK = "1"
 OrdinaryDiffEqTsit5 = "1"
 OrdinaryDiffEqVerner = "1"
+PEtab = "3.8"
 Plots = "1.40"
 QuasiMonteCarlo = "0.3"
 SciMLBase = "2.46"
diff --git a/docs/pages.jl b/docs/pages.jl
@@ -56,7 +56,7 @@ pages = Any[
         ]
     ],
     "Inverse problems" => Any[
-        #"inverse_problems/petab_ode_param_fitting.md",
+        "inverse_problems/petab_ode_param_fitting.md",
         "inverse_problems/optimization_ode_param_fitting.md",
         "inverse_problems/behaviour_optimisation.md",
         "inverse_problems/structural_identifiability.md",
diff --git a/docs/src/inverse_problems/petab_ode_param_fitting.md b/docs/src/inverse_problems/petab_ode_param_fitting.md

Original file line number	Diff line number	Diff line change
`@@ -56,7 +56,7 @@ pages = Any[`
`56`	`56`	`]`
`57`	`57`	`],`
`58`	`58`	`"Inverse problems" => Any[`
`59`		`- #"inverse_problems/petab_ode_param_fitting.md",`
	`59`	`+ "inverse_problems/petab_ode_param_fitting.md",`
`60`	`60`	`"inverse_problems/optimization_ode_param_fitting.md",`
`61`	`61`	`"inverse_problems/behaviour_optimisation.md",`
`62`	`62`	`"inverse_problems/structural_identifiability.md",`