Update ToolBase and config

[alexander-yevsyukov]

This PR applies latest config and bumps ToolBase to the latest version from this PR. As the result we're having latest external dependencies, including latest Protobuf.

[Copilot]

Pull Request Overview

This PR updates Protobuf to version 4.33.0 from 4.31.1, along with upgrading several related dependencies and build tools. The update requires restructuring imports for time-related functionality and adjusting build configurations to accommodate the new Protobuf version.

Key changes:

• Upgraded Protobuf from 4.31.1 to 4.33.0
• Updated multiple Spine dependencies (CoreJvm, Base, Time, ToolBase, etc.)
• Migrated time extension imports from io.spine.time.toInstant to io.spine.time.java.toInstant
• Added temporary Protobuf version compatibility check disabling in Gradle wrapper scripts
• Removed deprecated build files and utilities

Reviewed Changes

Copilot reviewed 34 out of 34 changed files in this pull request and generated 2 comments.

Show a summary per file

File	Description
buildSrc/src/main/kotlin/io/spine/dependency/lib/Protobuf.kt	Updates Protobuf version to 4.33.0
buildSrc/src/main/kotlin/io/spine/dependency/lib/Grpc.kt	Updates gRPC version to 1.76.0
buildSrc/src/main/kotlin/io/spine/dependency/lib/Guava.kt	Updates Guava version to 33.5.0-jre
buildSrc/src/main/kotlin/io/spine/dependency/local/Time.kt	Adds new Java and Kotlin extension artifacts for Time library
test-env/src/main/kotlin/io/spine/tools/compiler/test/EchoRenderer.kt	Updates import path for toInstant extension function
jvm/src/main/kotlin/io/spine/tools/compiler/jvm/annotation/ModifiedTypeAnnotation.kt	Updates import path for toInstant extension function
cli/src/test/kotlin/io/spine/tools/compiler/cli/app/MainSpec.kt	Updates import path for toInstant extension function
gradlew / gradlew.bat	Temporarily disables Protobuf version compatibility checks
buildSrc/src/main/kotlin/io/spine/dependency/test/JUnit.kt	Updates JUnit version to 6.0.0 and removes deprecated APIs
buildSrc/src/main/kotlin/BuildExtensions.kt	Adds ProtoData task dependencies and duplication handling

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[Copilot]

Pull Request Overview

Copilot reviewed 35 out of 36 changed files in this pull request and generated no new comments.

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Pull Request Overview

Copilot reviewed 34 out of 35 changed files in this pull request and generated 1 comment.

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[Copilot]

The function now accepts an optional version parameter but doesn't validate the module parameter when a custom version is provided. When version is non-empty, it should still verify that the module is valid before constructing the artifact string. Consider: artifacts.containsKey(module) || error(...) before line 74.

Suggested change

	"$module:$version"
	if (!artifacts.containsKey(module)) {
	error("The dependency `${this::class.simpleName}` does not declare a module `$module`.")
	}
	"$module:$version"