Create Dockerfile for 2.1.23

Author: cwoodside1278

build-files/diamond/2.1.23/Dockerfile

@@ -0,0 +1,37 @@
+FROM ubuntu:noble AS app
+
+ARG DIAMOND_VER="2.1.23"
+
+LABEL base.image="ubuntu:noble"
+LABEL dockerfile.version="1"
+LABEL software="DIAMOND"
+LABEL software.version="${DIAMOND_VER}"
+LABEL description="Accelerated BLAST compatible local sequence aligner."
+LABEL website="https://github.com/bbuchfink/diamond"
+LABEL license="https://github.com/bbuchfink/diamond/blob/master/LICENSE"
+LABEL maintainer="Kutluhan Incekara"
+LABEL maintainer.email="kutluhan.incekara@ct.gov"
+
+RUN apt-get update && apt-get install -y --no-install-recommends \
+    wget &&\
+    apt-get autoclean && rm -rf /var/lib/apt/lists/*
+
+RUN wget --quiet --no-check-certificate https://github.com/bbuchfink/diamond/releases/download/v${DIAMOND_VER}/diamond-linux64.tar.gz &&\
+    tar -C /usr/local/bin -xvf diamond-linux64.tar.gz && \
+    rm diamond-linux64.tar.gz
+
+ENV LC_ALL=C
+
+CMD [ "diamond", "help" ]
+
+WORKDIR /data
+
+## Test ##
+FROM app AS test
+
+RUN diamond test
+
+RUN wget --quiet --no-check-certificate https://scop.berkeley.edu/downloads/scopeseq-2.07/astral-scopedom-seqres-gd-sel-gs-bib-40-2.07.fa &&\
+    diamond makedb --in astral-scopedom-seqres-gd-sel-gs-bib-40-2.07.fa -d astral40 &&\
+    diamond blastp -q astral-scopedom-seqres-gd-sel-gs-bib-40-2.07.fa -d astral40 -o out.tsv --very-sensitive &&\
+    head out.tsv