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[Container Request]: Update Emmtyper to new database

enhancementNew feature or requestNew feature or request

Status: Open.

#1525 In StaPH-B/docker-builds;

· erinyoung opened on Jan 5, 2026

[Repo Request]: swap gitpod/Ona stuff with GHCodespaces

enhancementNew feature or requestNew feature or request

Status: Open.

#1476 In StaPH-B/docker-builds;

· kapsakcj opened on Nov 13, 2025

[Request An Update]: abricate + AcinetobacterPlasmidTyping to latest db version

enhancementNew feature or requestNew feature or request

Status: Open.

#1418 In StaPH-B/docker-builds;

· kapsakcj opened on Sep 4, 2025

[Request An Update]: update Mykrobe + genotyphi to genotyphi v2.1

enhancementNew feature or requestNew feature or request

Status: Open.

#1257 In StaPH-B/docker-builds;

· kapsakcj opened on Mar 20, 2025

Removing conda defaults channel

Status: Open.

#1249 In StaPH-B/docker-builds;

· Kincekara opened on Mar 5, 2025

[Request An Update]: Roary needs some perl updates

enhancementNew feature or requestNew feature or request

Status: Open.

#1173 In StaPH-B/docker-builds;

· erinyoung opened on Jan 15, 2025

[Container Request]: PacBio Secondary Analysis Tools

enhancementNew feature or requestNew feature or request

Status: Open.

#926 In StaPH-B/docker-builds;

· Kincekara opened on Mar 20, 2024

[Request An Update]: Gambit

enhancementNew feature or requestNew feature or request

Status: Open.

#905 In StaPH-B/docker-builds;

· erinyoung opened on Mar 14, 2024

[Repo Request]: New Templates

enhancementNew feature or requestNew feature or request

Status: Open.

#750 In StaPH-B/docker-builds;

· erinyoung opened on Sep 6, 2023

[Request An Update]: Auspice version 2.2

enhancementNew feature or requestNew feature or request

Status: Open.

#729 In StaPH-B/docker-builds;

· erinyoung opened on Sep 6, 2023

[Request An Update]: artic-ncov2019-epi2me to version 0.3.31 and include r10 models

enhancementNew feature or requestNew feature or request

Status: Open.

#689 In StaPH-B/docker-builds;

· kevinlibuit opened on Jul 6, 2023

ksnp3 - Missing app & test layer

enhancementNew feature or requestNew feature or request

good first issueGood for newcomersGood for newcomers

Status: Open.

#542 In StaPH-B/docker-builds;

· kevinlibuit opened on Jan 13, 2023