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📝 Update <code>06-semantic-segmentation notebook</code> for the New API

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 978

#978 In TissueImageAnalytics/tiatoolbox;

· by YijieZhu15 was closed on Feb 2, 2026

📝 Update contact address to <code>TIA@warwick.ac.uk</code>

documentationImprovements or additions to documentationImprovements or additions to documentation

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 986

#986 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Jan 22, 2026

🐛 Fix Division by Count in <code>SemanticSegmentor</code>

bugSomething isn't workingSomething isn't working

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 989

#989 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Jan 28, 2026

🔨 Fix Semantic Segmentor Memory Spill Issue

enhancementNew feature or requestNew feature or request

Status: Closed (abandoned).

TissueImageAnalytics/tiatoolboxnumber 988

#988 In TissueImageAnalytics/tiatoolbox;

· by Jiaqi-Lv was closed on Jan 29, 2026

🔨 Fix <code>SemanticSegmentor</code> Memory Spill Issue

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 990

#990 In TissueImageAnalytics/tiatoolbox;

· by Jiaqi-Lv was closed on Jan 31, 2026

♻️ Refactor Minor Changes to Keep #635 Clean

refactoringCode RefactoringCode Refactoring

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 705

#705 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Aug 29, 2023

♻️ Move <code>DataSet</code> Related Tests to <code>test_dataset.py</code>

refactoringCode RefactoringCode Refactoring

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 708

#708 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Aug 31, 2023

❇️ Add Function to Save Engines Output in the <code>zarr</code> Format

dev toolsChanges/Updates in Development toolsChanges/Updates in Development tools

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 724

#724 In TissueImageAnalytics/tiatoolbox;

· by AbishekRajVG was closed on Oct 26, 2023

✨ Add WSI processing to <code>EngineABC</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 737

#737 In TissueImageAnalytics/tiatoolbox;

· by AbishekRajVG was closed on Apr 26, 2024

♻️ Update <code>model_to()</code> and <code>load_torch_model()</code> methods in <code>ModelABC</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 733

#733 In TissueImageAnalytics/tiatoolbox;

· by AbishekRajVG was closed on Nov 15, 2023

🧑‍💻 Define <code>PatchPredictor</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 783

#783 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Sep 20, 2024

📌 Update <code>wsidicom</code> dependency

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 785

#785 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Feb 20, 2024

📌 Update minimum Python version to <code>3.9</code>

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 786

#786 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Feb 20, 2024

🐛 Fix <code>sccnn</code> Model

bugSomething isn't workingSomething isn't working

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 970

#970 In TissueImageAnalytics/tiatoolbox;

· by Jiaqi-Lv was closed on Nov 14, 2025

♻️ Refactor base code from <code>IOSegmentorConfig</code> to <code>ModelIOConfigABC</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 618

#618 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Jul 31, 2023

♻️ Move Dataset Classes to <code>dataset_abc.py</code>

code readability

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 637

#637 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Jul 31, 2023

🎨 New <code>EngineABC</code> Design for <code>Patches</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 635

#635 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Oct 31, 2023

🐛 Fix PLC0206

bugSomething isn't workingSomething isn't working

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 907

#907 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Jan 24, 2025

🐛 Fix <code>mypy</code> Type Checks for <code>cli/common.py</code>

bugSomething isn't workingSomething isn't working

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 864

#864 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Sep 20, 2024

✨ Add <code>PatchPredictor</code> Engine

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 865

#865 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Nov 20, 2024

🧑‍💻 pre-commit autoupdate

dependenciesPull requests that update a dependency filePull requests that update a dependency file

dev toolsChanges/Updates in Development toolsChanges/Updates in Development tools

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 966

#966 In TissueImageAnalytics/tiatoolbox;

· by pre-commit-ci was closed on Nov 5, 2025

🤗 HuggingFace for pretrained model weights hosting

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 945

#945 In TissueImageAnalytics/tiatoolbox;

· by mostafajahanifar was closed on Oct 17, 2025

📌 Update <code>Python</code> versions in <code>conda</code> requirements

dependenciesPull requests that update a dependency filePull requests that update a dependency file

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 959

#959 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Oct 17, 2025

🗑️ Implement clean up for test outputs

dev toolsChanges/Updates in Development toolsChanges/Updates in Development tools

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 960

#960 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Oct 17, 2025

🆕 Define <code>DeepFeatureExtractor</code>

enhancementNew feature or requestNew feature or request

Status: Merged (completed).

TissueImageAnalytics/tiatoolboxnumber 963

#963 In TissueImageAnalytics/tiatoolbox;

· by shaneahmed was closed on Dec 5, 2025