Skip to content
This repository was archived by the owner on Nov 17, 2023. It is now read-only.

2.0.0

Choose a tag to compare

View all tags
@afrubin afrubin released this 01 Jun 05:30
· 97 commits to main since this release
v2.0.0
567717a
This commit was created on GitHub.com and signed with GitHub’s verified signature. The key has expired.
GPG key ID: 4AEE18F83AFDEB23
Expired
Verified
Learn about vigilant mode.

This is a major update that includes numerous improvements, particularly in variant formatting and dataset validation.

Major

  • Saturation genome editing data is now supported, with a new hgvs_tx column that can describe splice variants.
  • The dataset search page has been rewritten to be more usable and more performant.
  • Variants are now represented using the format defined by MAVE-HGVS. This is very similar to the previous Enrich2-like format, but please consult the documentation for key differences.
  • Variants are now validated against the target sequence on upload.

Minor

  • Additional raw data accessions (GEO, ArrayExpress) are now supported.
  • A new admin page has been added to simplify database administration for staff.
  • MaveDB can now be deployed using Docker Compose. Developers should consult the new developer documentation for instructions on how to get a local instance up and running.
Assets 2
Loading