Ready for pre-print release

What's Changed

• Sc dino analysis by @MikeLippincott in #1
• update the readme by @MikeLippincott in #3
• reset the repo by @MikeLippincott in #6
• Generate UMAP embeddings by @MikeLippincott in #9
• calculate the mAP scores across time for all profile combinations by @MikeLippincott in #10
• Explore ground truth by @MikeLippincott in #7
• run analysis for features and cell tracks over time by @MikeLippincott in #8
• One off analysis by @MikeLippincott in #11
• data splitting by @MikeLippincott in #12
• train and evaluate models by @MikeLippincott in #13
• create metric vs. time plot by @MikeLippincott in #14
• perform linear modeling by @MikeLippincott in #15
• perform single-cell data splits by @MikeLippincott in #18
• rerun the one off analysis by @MikeLippincott in #16
• Evaluate model by @MikeLippincott in #17
• run EDA by @MikeLippincott in #20
• Bulk model figure by @MikeLippincott in #21
• add new bulk lm by @MikeLippincott in #22
• generate PCA spaces by @MikeLippincott in #25
• adjusted the figure by @MikeLippincott in #24
• add new figure by @MikeLippincott in #23
• rerun all analyses by @MikeLippincott in #26
• Montages by @MikeLippincott in #27
• terminal montages and figure by @MikeLippincott in #28
• rerun elastic net by @MikeLippincott in #29
• Redo figure 3 by @MikeLippincott in #32
• Fix na in umaps by @MikeLippincott in #31
• Stats for manuscript by @MikeLippincott in #33
• Fix bulk prediction figure by @MikeLippincott in #35
• Update time metric plots by @MikeLippincott in #37
• Linear model plot update by @MikeLippincott in #38
• Revamp annexin v figure by @MikeLippincott in #39
• Rework heatmap figure by @MikeLippincott in #36
• pseudo color images by @MikeLippincott in #34
• Add legend to figure 3 by @MikeLippincott in #40
• Update predictions figure by @MikeLippincott in #41
• Fix figure2 by @MikeLippincott in #42
• Update sf4 by @MikeLippincott in #43
• Update figure 6 by @MikeLippincott in #44
• Fig1 montage by @MikeLippincott in #46
• Add scale bars to figure 5 by @MikeLippincott in #47
• Generate movies by @MikeLippincott in #45

New Contributors

• @MikeLippincott made their first contribution in #1

Full Changelog: https://github.com/WayScience/live_cell_timelapse_apoptosis_analysis/commits/v0.0.1