The three tumultuous years of my master's program are coming to an end, and the result of my Ph.D application remains unknown.
Here, I would like to organize the next-generation sequencing(NGS) data analysis I have done during my master's phase, mainly focusing on learning materials and scripts.
The construction of this repository is based on the bioinformatics notes I initially learned, which were written by postdoc researcher Dr.Fajin Li.
I am extremely fortunate to have met him during my master's studies. Under his guidance, I began my journey into bioinformatics, not only resolving doubts in my research topics but also gradually understanding how to think critically in scientific research. More importantly, I have learned valuable qualities of a outstanding researcher from him.
So far, the data analysis I have been involved in has primarily focused on translation regulation using ribosome profiling technology. Additionally, I have also completed data analysis for RNA-seq, scRNA-seq, and PAR-CLIP seq, but these analyses were not particularly in-depth.
- Ribo-seq data analysis
- RNA-seq data analysis
- PAR-CLIP seq data analysis
- scRNA-seq data analysis (10x Genomics)