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1. Danko-Lab/clipnet Danko-Lab/clipnet Public

   A deep learning approach to predicting transcription initiation from sequence at single nucleotide resolution

   Jupyter Notebook 14 3

2. PersonalBPNet PersonalBPNet Public

   A small modification to bpnetlite's BPNet to accomodate large validation datasets.

   Python 4 1

3. TROGDOR TROGDOR Public

   Transcription Run-On Generates Detector Of Regulatory elements (TROGDOR).

   Python 1

4. Danko-Lab/clipnet_finetuning Danko-Lab/clipnet_finetuning Public

   Fine tuning CLIPNET models to predict K562 PRO-cap and PRO-seq profiles

   Jupyter Notebook 1