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re-adding STAR#17

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fhartley101 wants to merge 3 commits intoalebarberis:developfrom
fhartley101:STAR-readdition
Open

re-adding STAR#17
fhartley101 wants to merge 3 commits intoalebarberis:developfrom
fhartley101:STAR-readdition

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@fhartley101
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re-addition of star modules
I also change the name of genecounts to summarise_featurecounts to better describe the process

This also fixes the bug I discovered where featureCounts misnamed some files

@fhartley101 fhartley101 changed the base branch from main to develop June 20, 2024 14:39
Had deleted this from the github version but not my own - re-fixed
removed section for displaying cutadapt options as it doesn't seem to be possible
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