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Make Gene-HPOTerm associations non-transitive#28

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anergictcell merged 7 commits intomasterfrom
feature/non-transitive-genes
Mar 9, 2025
Merged

Make Gene-HPOTerm associations non-transitive#28
anergictcell merged 7 commits intomasterfrom
feature/non-transitive-genes

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  • Removed Ontology export to dataframe and pandas dependencies
  • Change logic of gene-HPO association parsing to be non-transitive by default
  • Add method to convert genes or diseases to HPOSet
  • Update documentation
  • Update minimum Python requirement to 3.8
  • Remove dependencies for backporting logic to Python 3.7

@anergictcell anergictcell merged commit 914022b into master Mar 9, 2025
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