The package provides several functions to calculate mutational signature interaction metrics.
cor_coda- pearson correlations based on compositional data analysiscooccurrence- co-occurrence or mutual exclusivity based on Fisher's exact testbcmi- Bias-corrected Mutual Information from mpmi packagecor_sigs- Spearman or Pearson correlations
The package also provides a function to produce summary interaction networks based on calculated interaction metrics.
Check the documentation of function plot_interaction_networks to see how plotting works.