This repository was archived by the owner on Oct 31, 2025. It is now read-only.
Version 0.1.0
This release adds a couple new features and a bunch of improvements to existing ones.
New features:
perform_permanova()does permutational analysis of variance using package calledPERMANOVAperform_pairwise_t_test()has new parameteris_pairedwhich allows paired version of pairwise t-testsclean_stats_results()can be used to rename and remove columns from statistics results- Error messages will be logged to a file after
init_log() - Merging MetaboSet objects will now create dummy (negative incrementing) injection order if injection order differs between modes
- Sample identification column can now be passed to
read_from_excel()
Other changes:
mz_rt_plot()plots can now be filtered by p-values and low-quality features can be dropped from a MetaboSet objectvolcano_plot()plots can be labeledcohens_d()is now able to handle multiple comparisons at onceread_from_excel()will now check that mass-to-charge and retention time values are reasonable, limits can be adjusted- Column names in statistics results, excluding linear models, follow group + comparison + value style
Bug fixes:
- Simple imputation fails when only one feature satisfies NA limit
...arguments will be passed forward inperform_correlation_tests()