ctakes pbj and ctakes cnlpt examples

End-to-end PBJ Examples

Temporal Example

• You first need to get the API side up and running. To do this you need to follow the steps listed here.
• Once that is running you need to then create this configuration for StartTemporalExample.piper file.
  -p org/apache/ctakes/pbj/pipeline/StartTemporalExample
  -i (input)
  -a (folder where your Artemis broker is)
  -d (enviroment)
  -o (output)
  --key (UMLS key)
  
• You should now be able to run that piper file while the API side is running. You can look at the output of running the piper file in "temporal_py.log" as well as the output file that you put into the configuration.
  

Negation Example

• You first need to get the API side up and running. To do this you need to follow the steps listed here.
• Once that is running you need to then create this configuration for StartNegationExample.piper file.
  -p org/apache/ctakes/pbj/pipeline/StartNegationExample
  -i (input)
  -a (folder where your Artemis broker is)
  -d (enviroment)
  -o (output)
  --key (UMLS key)
  
• You should now be able to run that piper file while the API side is running. You can look at the output of running the piper file in "negation_py.log" as well as the output file that you put into the configuration.
  

DTR Example

• You first need to get the API side up and running. To do this you need to follow the steps listed here.
• Once that is running you need to then create this configuration for StartDtrExample.piper file.
  -p org/apache/ctakes/pbj/pipeline/StartDtrExample
  -i (input)
  -a (folder where your Artemis broker is)
  -d (enviroment)
  -o (output)
  --key (UMLS key)
  
• You should now be able to run that piper file while the API side is running. You can look at the output of running the piper file in "dtr_py.log" as well as the output file that you put into the configuration.