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@arpcard

Comprehensive Antibiotic Resistance Database

Software, Curation, and Data for the Comprehensive Antibiotic Resistance Database. Contributions welcome!

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  1. rgi rgi Public

    Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

    Python 402 85

  2. CARPDM CARPDM Public

    Comprehensive Antibiotic Resistance Probe Design Machine (CARPDM) for design of hybridization probes based on CARD reference sequences.

    Python 3 2

  3. amr_curation amr_curation Public

    A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.

    63 7

  4. aro aro Public

    The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic. It reflects the latest curation at CARD.

    Makefile 21 7

  5. FAQ FAQ Public

    Frequently asked questions for CARD, RGI, and ARO.

    3 1

  6. aro-next aro-next Public

    The next major phase of ARO development has begun, addressing issues of orthogonality and fundamental ontological design. ARO Next development is independent of ongoing curation at CARD.

    3

Repositories

Showing 10 of 16 repositories
  • rgi Public

    Resistance Gene Identifier (RGI). Software to predict resistomes from protein or nucleotide data, including metagenomics data, based on homology and SNP models.

    arpcard/rgi’s past year of commit activity
    Python 402 85 1 0 Updated Jan 12, 2026
  • mobio Public

    The Mobilome Ontology describes bacterial mobile genetic elements, their mechanisms, and associated epidemiology.

    arpcard/mobio’s past year of commit activity
    Makefile 10 3 3 0 Updated Oct 2, 2025
  • aro Public

    The Antibiotic Resistance Ontology (ARO) organizes the information describing the ability of a microorganism to withstand the effects of an antibiotic. It reflects the latest curation at CARD.

    arpcard/aro’s past year of commit activity
    Makefile 21 CC-BY-4.0 7 2 0 Updated Oct 2, 2025
  • aro-next Public

    The next major phase of ARO development has begun, addressing issues of orthogonality and fundamental ontological design. ARO Next development is independent of ongoing curation at CARD.

    arpcard/aro-next’s past year of commit activity
    3 CC-BY-4.0 0 0 0 Updated Oct 2, 2025
  • viro Public

    CARD's draft Virulence Ontology (VIRO) describing bacterial virulence

    arpcard/viro’s past year of commit activity
    Makefile 1 0 0 0 Updated Sep 23, 2025
  • rgi_wrapper Public

    RGI galaxy project wrapper

    arpcard/rgi_wrapper’s past year of commit activity
    Python 0 2 1 1 Updated Sep 23, 2025
  • CARPDM Public

    Comprehensive Antibiotic Resistance Probe Design Machine (CARPDM) for design of hybridization probes based on CARD reference sequences.

    arpcard/CARPDM’s past year of commit activity
    Python 3 2 0 0 Updated Sep 23, 2025
  • amr_curation Public

    A public repository for collective curation of antimicrobial resistance (AMR) genes and mutations. Submit, discuss, and resolve AMR curation issues.

    arpcard/amr_curation’s past year of commit activity
    63 7 10 0 Updated Sep 23, 2025
  • FAQ Public

    Frequently asked questions for CARD, RGI, and ARO.

    arpcard/FAQ’s past year of commit activity
    3 1 0 0 Updated Aug 5, 2024
  • CARD-ARCS Public

    CARD ARCS

    arpcard/CARD-ARCS’s past year of commit activity
    0 0 0 0 Updated Apr 15, 2024
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