v1.0.0 Ter
This release contains a very complete set of analysis and QCs.
Many of them are updated versions of the earlier ones together with some code cleaning and new features.
What's Changed
- Diverse updates and fixes by @FerriolCalvet in #335
- Add contamination check by @FerriolCalvet in #317
- Add several plotting scripts by @FerriolCalvet in #333
- New mutation density calculation: closes #272 by @koszulordie in #338
- Add SigProfilerMatrixGenerator by @FerriolCalvet in #345
- Set minimum mutations per sample threshold by @FerriolCalvet in #346
- Automatically parse PMEAN and PSTD if available by @FerriolCalvet in #349
- Update feature groups input definition by @FerriolCalvet in #350
- Add several plotting updates by @FerriolCalvet in #354
- Add mutation densities QC plots by @rochamorro1 in #356
- LICENSE, linting and other minor updates by @FerriolCalvet in #347
- Allow the option to plot selection and saturation at the level of groups by @FerriolCalvet in #366
- fix bug that outputted empty maf files by @FerriolCalvet in #367
- Add globalloc synonymous numbers QC by @FerriolCalvet in #370
- fix bug in redefinition of panel with subgenic elements by @FerriolCalvet in #373
- Update container for HDP signature extraction by @FerriolCalvet in #362
- Add Nanoseq masks as filters by @m-huertasp in #374
- add test setup and first tests by @FerriolCalvet in #375
- New release: v1.0.0 Ter by @FerriolCalvet in #377
New Contributors
- @rochamorro1 made their first contribution in #356
- @m-huertasp made their first contribution in #374
Full Changelog: v0.2.0-alpha...v1.0.0