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feat: fix the package version in yaml file
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+12
-14
lines changed

2 files changed

+12
-14
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workflow/envs/main.yaml

Lines changed: 5 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -1,13 +1,11 @@
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name: rnaseq-preprocess
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channels:
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- defaults
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- conda-forge
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- bioconda
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channel_priority: strict
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dependencies:
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- python=3.11
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- fastp=0.23.2
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- fastqc=0.11.9
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- kallisto=0.46.2
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- multiqc=1.13
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- conda-forge::python=3.11
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- bioconda::fastp=0.23.2
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- bioconda::fastqc=0.11.9
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- bioconda::kallisto=0.46.2
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- bioconda::multiqc=1.13

workflow/envs/ref.yaml

Lines changed: 7 additions & 7 deletions
Original file line numberDiff line numberDiff line change
@@ -2,11 +2,11 @@ name: r-gtf
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channels:
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- conda-forge
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- bioconda
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- defaults
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channel_priority: strict
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dependencies:
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- r-base=4.3
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- r-dplyr=1.1.4
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- bioconductor-rtracklayer=1.62.0
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- bioconductor-org.hs.eg.db=3.18.0
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- kallisto=0.46.2
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- gffread
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- conda-forge::r-base=4.3
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- conda-forge::r-dplyr=1.1.4
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- bioconda::bioconductor-rtracklayer=1.62.0
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- bioconda::bioconductor-org.hs.eg.db=3.18.0
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- bioconda::kallisto=0.46.2
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- bioconda::gffread=0.12.7

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