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lines changed Original file line number Diff line number Diff line change 11name : rnaseq-preprocess
22channels :
3- - defaults
43 - conda-forge
54 - bioconda
65channel_priority : strict
7-
86dependencies :
9- - python=3.11
10- - fastp=0.23.2
11- - fastqc=0.11.9
12- - kallisto=0.46.2
13- - multiqc=1.13
7+ - conda-forge:: python=3.11
8+ - bioconda:: fastp=0.23.2
9+ - bioconda:: fastqc=0.11.9
10+ - bioconda:: kallisto=0.46.2
11+ - bioconda:: multiqc=1.13
Original file line number Diff line number Diff line change @@ -2,11 +2,11 @@ name: r-gtf
22channels :
33 - conda-forge
44 - bioconda
5- - defaults
5+ channel_priority : strict
66dependencies :
7- - r-base=4.3
8- - r-dplyr=1.1.4
9- - bioconductor-rtracklayer=1.62.0
10- - bioconductor-org.hs.eg.db=3.18.0
11- - kallisto=0.46.2
12- - gffread
7+ - conda-forge:: r-base=4.3
8+ - conda-forge:: r-dplyr=1.1.4
9+ - bioconda:: bioconductor-rtracklayer=1.62.0
10+ - bioconda:: bioconductor-org.hs.eg.db=3.18.0
11+ - bioconda:: kallisto=0.46.2
12+ - bioconda:: gffread=0.12.7
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