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v0.1.0-alpha.1

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@eecavanna eecavanna released this 12 Jun 19:11
· 34 commits to main since this release
423fcbf

What's Changed

  • Add Python notebook that fetches biosample lat_lon data via NMDC API by @eecavanna in #1
  • Add Python notebooks related to ingesting data into MongoDB and generating interactive maps by @eecavanna in #4
  • Add web page that loads raw data from GitHub and displays in on a Leaflet map by @eecavanna in #5
  • Shrink logo markers to 20px and add remaining hyperlinks by @eecavanna in #8
  • Allow user to show/hide marker groups while allowing clusters to contain markers from different groups by @eecavanna in #9
  • Package scaffold by @luizirber in #6
  • EMSL non-MONet data by @madettmann in #12
  • GitHub Actions: adding in some basic actions by @ialarmedalien in #11
  • Display data source logos in marker popups and replace GOLD logo with JGI logo by @eecavanna in #13
  • Add notebook for generating geodata, and example json files by @shreddd in #14
  • Refine map web page by @eecavanna in #17
  • Add BERtron logo to page header (easter egg) by @eecavanna in #18
  • Update NMDC notebook so it fetches more than 10,000 biosamples by @eecavanna in #20
  • adding emsl samples by @madettmann in #22
  • adding emsl markers by @madettmann in #23
  • Bump nmdc-api-utilities from 0.3.1 to 0.3.6 in the python-packages group by @dependabot in #21
  • Bump astral-sh/setup-uv from 5 to 6 in /.github/workflows by @dependabot in #24
  • Bump nmdc-api-utilities package from 0.3.1 to 0.3.9 by @aclum in #28
  • Hide spinner once map has finished loading by @eecavanna in #30
  • Update file-to-Mongo ingester and deprecate old scripts by @shreddd in #35
  • Implement a container-based development environment by @eecavanna in #36
  • Delete early data files/scripts and update map to fetch data from data repo by @eecavanna in #44
  • support docker based ingest by @shreddd in #45
  • Update original contribution guidance to link to CONTRIBUTING.md page by @eecavanna in #46
  • Implement GHA workflow that builds/pushes container image to GHCR by @eecavanna in #50
  • Configure GitHub Actions to run tests by @jeff-cohere in #43

New Contributors

Full Changelog: https://github.com/ber-data/bertron/commits/v0.1.0-alpha.1