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3cedc86
Merge pull request #2 from bids-standard/master
ericearl May 20, 2025
11fbb47
Merge pull request #3 from bids-standard/master
ericearl May 30, 2025
0ef9fdf
[ENH] Integrate BEP036 - Phenotypic Data Guidelines
surchs May 30, 2025
0a640e6
Update phenotype.md and data-summary-files.md
ericearl May 30, 2025
a19512b
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] May 30, 2025
5718888
Update data-summary-files.md and phenotypic-and-assessment-data.md
ericearl May 30, 2025
8f54e94
Apply suggestions from code review
ericearl May 30, 2025
94cb476
Apply suggestions from code review
ericearl May 30, 2025
142c460
Apply suggestions from code review
ericearl May 30, 2025
8b78359
Update src/modality-agnostic-files/phenotypic-and-assessment-data.md
ericearl May 30, 2025
60f712a
Update mkdocs.yml
ericearl May 30, 2025
e62b5cc
Update src/modality-agnostic-files/phenotypic-and-assessment-data.md
ericearl May 30, 2025
ac097aa
Update phenotype.md to have a macro table from schema
ericearl Jun 24, 2025
32fedd0
Update src/schema/rules/tabular_data/modality_agnostic.yaml
ericearl Jun 24, 2025
aacda9b
Update modality_agnostic.yaml
ericearl Jun 24, 2025
fd5ff2d
Update phenotype.md appendix and modality_agnostic.yaml schema
ericearl Jun 24, 2025
dd65b5e
Update modality_agnsotic.yaml
ericearl Jun 24, 2025
f4205e8
add missing column objects, use existing acq column definition (#4)
rwblair Jul 17, 2025
0eba71d
Updates for BEP036
ericearl Jul 17, 2025
d3631a8
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Jul 17, 2025
f4939ad
Updates phentoype.md and Guideline 3 in the modality agmpstic section
ericearl Jul 17, 2025
abd5c2b
Update modality_agnostic.yaml
ericearl Jul 17, 2025
ec2c53d
Update phenotypic-and-assessment_data.md
ericearl Jul 17, 2025
7639001
Merge branch 'master' into master
ericearl Jul 17, 2025
8b38859
Merge branch 'bids-standard:master' into master
ericearl Sep 15, 2025
d1141a0
Updates to remove demographics file and add AdditionalValidation field
ericearl Sep 17, 2025
6c6ee8b
Attempting to satisfy the CI and remark
ericearl Sep 17, 2025
9f8afec
Merge branch 'bids-standard:master' into master
ericearl Sep 17, 2025
8fa89bc
Update src/schema/rules/tabular_data/modality_agnostic.yaml
effigies Sep 18, 2025
ff86669
Update columns.yaml
ericearl Sep 18, 2025
ede68ef
Update modality_agnostic.yaml
ericearl Sep 18, 2025
e8ab5dd
Update phenotype.md appendix examples, participants schema, and other…
ericearl Sep 22, 2025
3490e9d
Update modality_agnostic.yaml
ericearl Sep 23, 2025
d02e0bf
Update modality_agnostic.yaml
ericearl Sep 23, 2025
f8d6333
Update modality_agnostic.yaml
ericearl Sep 23, 2025
bd083c0
Update phenotype appendix
ericearl Sep 24, 2025
ec2703b
Update phenotype appendix
ericearl Sep 24, 2025
00d8f25
Delete .vscode/settings.json
ericearl Sep 25, 2025
41f0f70
Apply suggestions from code review
ericearl Sep 25, 2025
cdfc0d2
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 25, 2025
6cbb4ee
Update BEP036 files more
ericearl Sep 29, 2025
fe3ddab
Update appendices/phenotype.md
ericearl Sep 29, 2025
40f6751
Update src/schema/rules/tabular_data/modality_agnostic.yaml
ericearl Sep 30, 2025
2fd12d7
Update src/schema/objects/columns.yaml
ericearl Sep 30, 2025
a0cab8b
Update src/appendices/phenotype.md
ericearl Sep 30, 2025
c0bd78a
[pre-commit.ci] auto fixes from pre-commit.com hooks
pre-commit-ci[bot] Sep 30, 2025
97917f0
Update src/modality-agnostic-files/data-summary-files.md
ericearl Sep 30, 2025
80683f6
Merge branch 'master' into master
surchs Sep 30, 2025
76932fe
Move longitudinal age section to point 1
surchs Sep 30, 2025
32f994e
Revise section 5
surchs Sep 30, 2025
3a602ca
fix: Participant ID mismatch check
effigies Oct 1, 2025
f8d492e
fix(schema): Resolve a couple issues
effigies Oct 1, 2025
7f1eb09
feat: Expanded validation checks
effigies Oct 1, 2025
5c55eb9
deduplicate
effigies Oct 1, 2025
c0951f3
Promote Participants
effigies Oct 1, 2025
69183c7
feat: Make MeasurementToolMetadata recommended for phenotype files
effigies Oct 2, 2025
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1 change: 1 addition & 0 deletions mkdocs.yml
Original file line number Diff line number Diff line change
Expand Up @@ -46,6 +46,7 @@ nav:
- Quantitative MRI: appendices/qmri.md
- Arterial Spin Labeling: appendices/arterial-spin-labeling.md
- Cross modality correspondence: appendices/cross-modality-correspondence.md
- Phenotypic data guidelines: appendices/phenotype.md
- Changelog: CHANGES.md
- The BIDS Starter Kit:
- Website: https://bids.neuroimaging.io/getting_started/
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