0.3.0

CHANGES:

• better documentation (thanks to Corentin Moumard)
• implementation of Muse and Gaut 94 evolution model
• few bug fixes and API changes

0.2.0

CHANGES:

• Phylo_ctmc: pruning algorithm with ambiguous observations
• Phylo_ctmc: introduced matrix decomposition to reduce pruning complexity
• Codon: implemented all genetic codes
• Simulator: optimized implementation for Gillespie direct method
• Newick: improved representation and conversion to Tree
• few other optimizations, more tests

0.1.0

CHANGES:

• new Nucleotide_process module, implementing classical nucleotide
  evolution models
• Mutsel: added persistent positive selection
• Rate_matrix: added HKY85 model
• Alphabet, Alignment: a few more functions

0.0.0

CHANGES:

First release on OPAM