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Fix/819 Fix incorrect g->c mapping when CIGAR alignment gaps overlap variant interval #823

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Fix/819 Fix incorrect g->c mapping when CIGAR alignment gaps overlap variant interval #823

removing accidentally commited files
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SonarQubeCloud / SonarCloud Code Analysis succeeded Mar 26, 2026 in 27s

Quality Gate passed

Issues
2 New issues
0 Accepted issues

Measures
0 Security Hotspots
0.0% Coverage on New Code
0.0% Duplication on New Code

See analysis details on SonarQube Cloud

Annotations

Check failure on line 791 in src/hgvs/variantmapper.py

See this annotation in the file changed.

@sonarqubecloud sonarqubecloud / SonarCloud Code Analysis

Refactor this function to reduce its Cognitive Complexity from 24 to the 15 allowed. 

See more on https://sonarcloud.io/project/issues?id=biocommons_hgvs&issues=AZ0qzPmFP8bj0kFn5Mm3&open=AZ0qzPmFP8bj0kFn5Mm3&pullRequest=823

Check failure on line 137 in src/hgvs/variantmapper.py

See this annotation in the file changed.

@sonarqubecloud sonarqubecloud / SonarCloud Code Analysis

Refactor this function to reduce its Cognitive Complexity from 17 to the 15 allowed. 

See more on https://sonarcloud.io/project/issues?id=biocommons_hgvs&issues=AZ0qzPmFP8bj0kFn5Mm2&open=AZ0qzPmFP8bj0kFn5Mm2&pullRequest=823
View more details on SonarQubeCloud