support process_def params as config items

Author: jcschaff

src/simple_process_bigraph_runtime/__init__.py

@@ -1 +1 @@
-from registry import spatio_flux_library
+from simple_process_bigraph_runtime.registry import spatio_flux_library

src/simple_process_bigraph_runtime/dsl_adapter.py

@@ -1,5 +1,5 @@
 import os
-import rich
+
 from process_bigraph_lang.antlr_dsl.generate import bind_model
 from process_bigraph_lang.dsl import generate
 from process_bigraph_lang.dsl.model import (

src/simple_process_bigraph_runtime/generation/composite_generator.py

@@ -63,10 +63,11 @@ def process_composite(model: Model, assembler: Vivarium):
                     if 0 == len(out_binding):
                         for token in map_key.split("::"):
                             out_binding.append(token)
+            config = {p.name: p.default.val for p in process_def_actual.params}
             assembler.add_process(
                 name=process.name,
                 process_id=".".join(process_def_actual.python_path.path),
-                # config=config,
+                config=config,
                 inputs=input_bindings,
                 outputs=output_bindings,
             )

src/simple_process_bigraph_runtime/registry/toy_library.py

@@ -60,7 +60,7 @@ def inputs(self):
         }
 
     def update(self, state):
-        with open(os.path.expanduser("~/Documents/pb_output_dir/output_value.txt"), "w+") as f:
+        with open(os.path.expanduser(self.config["output_file_path"]), "w+") as f:
             f.write(str(state["result"]))
 
 class SaveFloatToFileRepeatedly(Process):
@@ -71,7 +71,7 @@ def inputs(self):
 
     def update(self, state, interval):
         value = str(state["result"])
-        with open(os.path.expanduser("~/Documents/pb_output_dir/output_value.txt"), "w+") as f:
+        with open(os.path.expanduser(self.config["output_file_path"]), "w+") as f:
             f.write(value)
 
 class AddComplexNumbers(Step):