Open
Conversation
stellaning1120
commented
Feb 16, 2024
stellaning1120
commented
Feb 16, 2024
stellaning1120
commented
Feb 16, 2024
stellaning1120
commented
Feb 16, 2024
stellaning1120
commented
Feb 16, 2024
…n, get rid of rawsfc task, and modified CollectRawWgsMetrics part
stellaning1120
commented
Mar 1, 2024
yueyaog
reviewed
May 10, 2024
CODEC/Dockerfile
Outdated
|
|
||
|
|
||
| # Clone the CODECsuite repository | ||
| RUN git clone --recursive https://github.com/broadinstitute/CODECsuite.git /CODECsuite |
Collaborator
There was a problem hiding this comment.
Separate CODEC Docker from the rest of Docker images that were used in the CODEC WDL.
…ified the dockstore.yml to add this pipeline to Public workflows
The way gs:// path is interpolated with cromwell changed with GCP batch.
update duplex efficiency calc to match SMaHT request
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
We should review this and push our codec pipeline to dockstore!