Removed pairwise batch effect checks from WDL workflow#617

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shadizaheri wants to merge 12 commits intomainfrom

sz_no_pairwise_batch_effect

Commits on Jan 6, 2023

add toggle for unstable af filter during label step in batch effect
epiercehoffman
committed

Commits on Jan 23, 2023

Commits on Nov 9, 2023

Removed pairwise batch effect checks from WDL workflow
shadizaheri
committed

Commits on Nov 10, 2023

no_pairwise_no_unstable_af_filter
shadizaheri
committed

Commits on Nov 17, 2023

Merge branch 'eph_turn_off_unstable_af_filter' into sz_no_pairwise_batch_effect
shadizaheri
committed

Commits on Nov 20, 2023

Commits on Nov 29, 2023

Commits on Dec 1, 2023

Update make_batch_effect_reclassification_table.PCRMinus_only.R
shadizaheri
authored