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Pull requests: broadinstitute/gnomad_qc

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Pull requests list

Update resources for batch production work
#758 opened Feb 24, 2026 by mike-w-wilson • Draft
add vcf export for info ht
#756 opened Feb 13, 2026 by klaricch Loading…
2
add release code and resources
#750 opened Jan 29, 2026 by klaricch • Draft
29
v5 RF v5 Variant QC
#744 opened Jan 14, 2026 by mike-w-wilson • Draft
v5 vqsr v5 Variant QC
#743 opened Jan 7, 2026 by mike-w-wilson • Draft
@mike-w-wilson
2
Add code to export true positive VCFs
#742 opened Jan 6, 2026 by ch-kr Loading…
@ch-kr
Add code to create variant QC annotation HT
#741 opened Jan 6, 2026 by ch-kr Loading…
@ch-kr
Update AN/coverage code to support running in Batch
#727 opened Nov 14, 2025 by ch-kr • Draft
Bump the pip group across 1 directory with 3 updates dependencies python Pull requests that update Python code
#652 opened Jan 8, 2025 by dependabot bot Loading…
1
WIP: Initial commit for Rare Variant Sharing Relatedness v5
#639 opened Sep 26, 2024 by mike-w-wilson • Draft
@mike-w-wilson
Productionize LD code for gnomAD v4 SNVs/Indels v4.1
#634 opened Sep 11, 2024 by matren395 Loading…
@matren395
9
Bump the pip group across 2 directories with 3 updates dependencies
#624 opened Jul 6, 2024 by dependabot bot Loading…
Code to run logistic regression on v4 exomes and genomes with ancesty pcs
#616 opened May 22, 2024 by KoalaQin • Draft
@jkgoodrich @KoalaQin
16
False Duplication VCF Export
#570 opened Mar 7, 2024 by matren395 Loading…
@klaricch @matren395
35
First step for building the mermaid flow chart is to parse all the resources and add them as nodes to the flow chart Documentation
#555 opened Feb 9, 2024 by jkgoodrich Loading…
@ch-kr @jkgoodrich
4
ProTip! Follow long discussions with comments:>50.