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Create README.md #129

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jlchang Mar 5, 2024
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jlchang Mar 5, 2024
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9 changes: 9 additions & 0 deletions scripts/object_conversion/seurat/README.md
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[SCP2Seurat.Rmd](https://github.com/broadinstitute/single_cell_portal/blob/master/scripts/object_conversion/seurat/SCP2Seurat.Rmd) - R markdown documenting example Seurat object creation from SCP files

[SCP2Seurat.nb.html](https://rawcdn.githack.com/broadinstitute/single_cell_portal/eea1917586f0598eb81c24b83[…]21fae2b/scripts/object_conversion/seurat/SCP2Seurat.nb.html) - example run output for above R markdown document demonstrating how to create a Seurat object from SCP files

[generate_SCP_files.Rmd](https://github.com/broadinstitute/single_cell_portal/blob/master/scripts/object_conversion/seurat/generate_SCP_files.Rmd) - R markdown document of annotated example usage of seurat_scp_convenience.R to generate SCP files from a Seurat object

[generate_SCP_files.nb.html](https://rawcdn.githack.com/broadinstitute/single_cell_portal/blob/master/scripts/object_conversion/seurat/generate_SCP_files.nb.html) - example run output for above R markdown document demonstrating how to generate SCP files from a Seurat object

[seurat_scp_convenience.R](https://github.com/broadinstitute/single_cell_portal/blob/master/scripts/object_conversion/seurat/seurat_scp_convenience.R) - code needed for generate_SCP_files.Rmd