Json schema to ontology

json-schema-to-ontology/.gitignore

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+/docs/html/
+
+# Byte-compiled / optimized / DLL files
+__pycache__/
+*.py[cod]
+*$py.class
+
+# C extensions
+*.so
+
+# Distribution / packaging
+.Python
+build/
+develop-eggs/
+dist/
+downloads/
+eggs/
+.eggs/
+lib/
+lib64/
+parts/
+sdist/
+var/
+wheels/
+pip-wheel-metadata/
+share/python-wheels/
+*.egg-info/
+.installed.cfg
+*.egg
+MANIFEST
+
+# PyInstaller
+#  Usually these files are written by a python script from a template
+#  before PyInstaller builds the exe, so as to inject date/other infos into it.
+*.manifest
+*.spec
+
+# Installer logs
+pip-log.txt
+pip-delete-this-directory.txt
+
+# Unit test / coverage reports
+htmlcov/
+.tox/
+.nox/
+.coverage
+.coverage.*
+.cache
+nosetests.xml
+coverage.xml
+*.cover
+*.py,cover
+.hypothesis/
+.pytest_cache/
+
+# Translations
+*.mo
+*.pot
+
+# Django stuff:
+*.log
+local_settings.py
+db.sqlite3
+db.sqlite3-journal
+
+# Flask stuff:
+instance/
+.webassets-cache
+
+# Scrapy stuff:
+.scrapy
+
+# Sphinx documentation
+docs/_build/
+
+# PyBuilder
+target/
+
+# Jupyter Notebook
+.ipynb_checkpoints
+
+# IPython
+profile_default/
+ipython_config.py
+
+# pyenv
+.python-version
+
+# pipenv
+#   According to pypa/pipenv#598, it is recommended to include Pipfile.lock in version control.
+#   However, in case of collaboration, if having platform-specific dependencies or dependencies
+#   having no cross-platform support, pipenv may install dependencies that don't work, or not
+#   install all needed dependencies.
+#Pipfile.lock
+
+# PEP 582; used by e.g. github.com/David-OConnor/pyflow
+__pypackages__/
+
+# Celery stuff
+celerybeat-schedule
+celerybeat.pid
+
+# SageMath parsed files
+*.sage.py
+
+# Environments
+.env
+.venv
+env/
+venv/
+ENV/
+env.bak/
+venv.bak/
+
+# Spyder project settings
+.spyderproject
+.spyproject
+
+# Rope project settings
+.ropeproject
+
+# mkdocs documentation
+/site
+
+# mypy
+.mypy_cache/
+.dmypy.json
+dmypy.json
+
+# Pyre type checker
+.pyre/

json-schema-to-ontology/Dockerfile

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+# We use Debian as base image for the reasons given on
+# https://pythonspeed.com/articles/base-image-python-docker-images/
+# see https://www.debian.org
+FROM debian:10.2-slim
+
+##################
+# As user `root` #
+##################
+
+# When you are on a Linux machine and when you run `docker build`, then set the
+# `--build-arg`s `GID` and `UID` to your user id and its primary group id. This
+# makes it seamless to use and generate files from within the shell of
+# a running docker container based on this image and access those files later
+# on the host.
+ARG UID=1000
+ARG GID=1000
+
+#-------------------------------------------#
+# Create non-root user `me` and group `us` #
+#-------------------------------------------#
+# which are used to run commands in later for security reasons,
+# see https://medium.com/@mccode/processes-in-containers-should-not-run-as-root-2feae3f0df3b
+RUN \
+  addgroup --system --gid ${GID} us && \
+  adduser --system --uid ${UID} --ingroup us me
+
+#---------------------------------------------------------#
+# Set locale to `en_US` and character encoding to `UTF-8` #
+#---------------------------------------------------------#
+# Inspired by https://stackoverflow.com/questions/28405902/how-to-set-the-locale-inside-a-debian-ubuntu-docker-container/38553499#38553499
+# and https://daten-und-bass.io/blog/fixing-missing-locale-setting-in-ubuntu-docker-image/
+RUN \
+  # Retrieve new lists of packages
+  apt-get update && \
+  # Install `locales`
+  DEBIAN_FRONTEND=noninteractive \
+    apt-get install --assume-yes --no-install-recommends \
+      locales && \
+  # Set locale to `en_US.UTF-8`
+  sed --in-place --expression \
+    's/# en_US.UTF-8 UTF-8/en_US.UTF-8 UTF-8/' \
+    /etc/locale.gen && \
+  dpkg-reconfigure --frontend=noninteractive \
+    locales && \
+  update-locale LANG=en_US.UTF-8 && \
+  # Remove unused packages, erase archive files, and remove lists of packages
+  apt-get autoremove --assume-yes && \
+  apt-get clean && \
+  rm --recursive --force /var/lib/apt/lists/*
+# Set environment variable `LANG`
+ENV LANG en_US.UTF-8
+
+#-------------------------------#
+# Make `bash` the default shell #
+#-------------------------------#
+# In particular, `ln ... bash /bin/sh` makes Python's `subprocess` module use
+# `bash` by default. If we want to make sure that `bash` is always used
+# regardless of the default shell, we can pass `executable="/bin/bash"` to
+# Python's `subprocess#run` function.
+RUN \
+  ln --symbolic --force \
+    bash /bin/sh && \
+  sed --in-place --expression \
+    "s#bin/dash#bin/bash#" \
+    /etc/passwd
+
+#---------------------#
+# Install `dumb-init` #
+#---------------------#
+# a minimal init system for Linux containers, see https://github.com/Yelp/dumb-init
+RUN \
+  # Retrieve new lists of packages
+  apt-get update && \
+  # Install `dumb-init`
+  apt-get install --assume-yes --no-install-recommends \
+    dumb-init && \
+  # Remove unused packages, erase archive files, and remove lists of packages
+  apt-get autoremove --assume-yes && \
+  apt-get clean && \
+  rm --recursive --force /var/lib/apt/lists/*
+
+#----------------------------------------------#
+# Install run-time system dependencies and pip #
+#----------------------------------------------#
+# * Python is an interpreted, high-level, general-purpose programming language,
+#   see https://www.python.org
+# * pip is a Python package installer, see https://pip.pypa.io/en/stable/
+RUN \
+  # Retrieve new lists of packages
+  apt-get update && \
+  # Install Fener's run-time system dependencies and pip
+  apt-get install --assume-yes --no-install-recommends \
+    python3 \
+    python3-pip && \
+  # Make the commands `python` and `pip` refer to `*3`
+  ln --symbolic \
+    /usr/bin/python3 /usr/bin/python && \
+  ln --symbolic \
+    pip3 /usr/bin/pip && \
+  # Remove unused packages, erase archive files, and remove lists of packages
+  apt-get autoremove --assume-yes && \
+  apt-get clean && \
+  rm --recursive --force /var/lib/apt/lists/*
+
+#--------------------------------------------#
+# Install build Python packages dependencies #
+#--------------------------------------------#
+RUN \
+  pip install --no-cache-dir \
+    setuptools
+
+#---------------------------#
+# Install development tools #
+#---------------------------#
+# In particular,
+# * GNU Make to run often needed commands, see https://www.gnu.org/software/make
+# * Black as Python code formatter, see https://github.com/psf/black
+# * Mypy as static type checker for Python, see http://mypy-lang.org
+# * Pylint as bug and quality checker for Python, see https://www.pylint.org
+# * pytest as automated-testing framework, see https://docs.pytest.org
+# * Vulture to find dead Python code, see https://github.com/jendrikseipp/vulture
+RUN \
+  # Retrieve new lists of packages
+  apt-get update && \
+  # Install system development tools
+  apt-get install --assume-yes --no-install-recommends \
+    make && \
+  # Install development tools
+  pip install --no-cache-dir \
+    autoflake \
+    black \
+    flake8 \
+    mypy \
+    pycodestyle \
+    pyflakes \
+    pylint \
+    pytest \
+    sphinx \
+    vulture && \
+  # Remove unused packages, erase archive files, and remove lists of packages
+  apt-get autoremove --assume-yes && \
+  apt-get clean && \
+  rm --recursive --force /var/lib/apt/lists/*
+
+#-------------------------#
+# Set-up `/app` directory #
+#-------------------------#
+# Make the `/app` directory link to the `/home/me/app` directory and make both
+# be owned by the user `me` and the group `us`.
+RUN \
+  mkdir /home/me/app && \
+  chown me:us /home/me/app && \
+  ln --symbolic /home/me/app /app && \
+  chown me:us --no-dereference /app
+
+################
+# As user `me` #
+################
+# Switch to the user `me`
+USER me
+ENV USER=me
+# Make `/app` the default directory
+WORKDIR /app
+
+#-----------------------------#
+# Install Python dependencies #
+#-----------------------------#
+# See `packages.pip`
+COPY --chown=me:us \
+  ./requirements.txt .
+ENV PATH /home/me/.local/bin:$PATH
+RUN \
+  pip install \
+    --user \
+    --no-cache-dir \
+    -r ./requirements.txt
+
+#-------------------------------------------#
+# Set-up for containers based on this image #
+#-------------------------------------------#
+# Create mount points
+VOLUME /app/
+# VOLUME /home/me/.local
+
+# Run commands within the process supervisor and init system `dumb-init`
+ENTRYPOINT ["/usr/bin/dumb-init", "--"]
+# Make `bash` the default command
+CMD ["bash"]