fix: Add species list validation tool #33#38
Open
Sathyavrv wants to merge 1 commit intocalacademy-research:masterfrom
Open
fix: Add species list validation tool #33#38Sathyavrv wants to merge 1 commit intocalacademy-research:masterfrom
Sathyavrv wants to merge 1 commit intocalacademy-research:masterfrom
Conversation
Introduce a read-only pre-flight validator for uploaded species lists. Adds backend validator + DTOs (SpeciesListValidator, ValidateSpeciesReport, ValidateSpeciesResultItem, ValidationParseException), Struts form/action (ValidateSpeciesListForm, ValidateSpeciesListAction) and route, and JSP UI (validateSpeciesList.jsp + body) with a downloadable template. Validator supports two input formats (genus+species columns or taxon_name), enforces a 5MB / ~50k-row limit, performs minimal DB lookups (status/current_valid_name), fuzzy matching by genus, and an option to list unmatched valid taxa. Also adds link to the Curate tools in curate-body.jsp.
This file contains hidden or bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
1 participant
Add this suggestion to a batch that can be applied as a single commit.This suggestion is invalid because no changes were made to the code.Suggestions cannot be applied while the pull request is closed.Suggestions cannot be applied while viewing a subset of changes.Only one suggestion per line can be applied in a batch.Add this suggestion to a batch that can be applied as a single commit.Applying suggestions on deleted lines is not supported.You must change the existing code in this line in order to create a valid suggestion.Outdated suggestions cannot be applied.This suggestion has been applied or marked resolved.Suggestions cannot be applied from pending reviews.Suggestions cannot be applied on multi-line comments.Suggestions cannot be applied while the pull request is queued to merge.Suggestion cannot be applied right now. Please check back later.
Introduce a read-only pre-flight validator for uploaded species lists. Adds backend validator + DTOs (SpeciesListValidator, ValidateSpeciesReport, ValidateSpeciesResultItem, ValidationParseException), Struts form/action (ValidateSpeciesListForm, ValidateSpeciesListAction) and route, and JSP UI (validateSpeciesList.jsp + body) with a downloadable template. Validator supports two input formats (genus+species columns or taxon_name), enforces a 5MB / ~50k-row limit, performs minimal DB lookups (status/current_valid_name), fuzzy matching by genus, and an option to list unmatched valid taxa. Also adds link to the Curate tools in curate-body.jsp.