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graph module overhaul #90

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graph module overhaul #90

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6a88648
Refactor graph into submodules
kaitj Feb 20, 2026
0e66700
Update examples
kaitj Feb 20, 2026
488d5b3
Update tests
kaitj Feb 20, 2026
40136f0
Grab styx logger
kaitj Mar 6, 2026
a44bfb8
More refactoring / optimization
kaitj Mar 10, 2026
4db5138
Update unit tests
kaitj Mar 10, 2026
a306b37
Move resources
kaitj Mar 10, 2026
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6 changes: 3 additions & 3 deletions examples/example_graph_init.py
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Original file line number Diff line number Diff line change
Expand Up @@ -17,7 +17,7 @@
print(graph)

# Some extra info about the graph
print(graph.get_graph_info())
print(graph.utils.get_graph_info())

# Print species of each node
for node in graph.nodes(data=False):
Expand All @@ -39,7 +39,7 @@
)

# Plot only surface transforms
surface_subgraph = graph.get_subgraph("surface_to_surface")
surface_subgraph = graph.utils.get_subgraph("surface_to_surface")
plot_graph(
surface_subgraph,
graph_type="surface",
Expand All @@ -48,7 +48,7 @@
)

# Plot only volume transforms
volume_subgraph = graph.get_subgraph("volume_to_volume")
volume_subgraph = graph.utils.get_subgraph("volume_to_volume")
plot_graph(
volume_subgraph,
graph_type="volume",
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2 changes: 1 addition & 1 deletion examples/example_surface_transform.py
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Original file line number Diff line number Diff line change
Expand Up @@ -37,7 +37,7 @@
print("Label surface-to-surface transformation failed.")

# see updated graph
surface_subgraph = graph.get_subgraph("surface_to_surface")
surface_subgraph = graph.utils.get_subgraph("surface_to_surface")
plot_graph(
surface_subgraph,
graph_type="surface",
Expand Down
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