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collab-workflows

A collection of scientific computing workflows for drug discovery, molecular analysis, and proteomics research. Each workflow is a containerized, modular pipeline with visualization.

Workflows

  1. 🏁
  2. 🏁
  3. Virtual screening (by Diego Lima) $^{silva ✅ potter ✅}$
  4. 🚧
  5. QSAR Modeling Pipeline - ML-based drug binding prediction based on Divya Karade's QSAR model by Divya Karade $^{silva ✅ potter 🚧}$
  6. 🚧
  7. Protein pocket detection based on Pocketeer from Charlie Harris by Chiral Dev Team $^{silva ✅ potter ✅}$
  8. Proteomics data processing by Abdelrahman Mohamed Taha MAHMOUD $^{silva ✅ potter ✅}$
  9. FEgrow An Open-Source Molecular Builder and Free Energy Preparation Workflow by Koki Shinbara and Chiral Dev Team $^{silva ✅ potter ✅}$
  10. Chiral #1 Online Challenge - Molecular Docking $^{silva ✅ potter ✅}$
  11. QSAR Modeling Pipeline - ML-based drug binding prediction by Abdelrahman Mohamed Taha MAHMOUD $^{silva ✅ potter 🚧}$
  12. Boltz-2 Structure Prediction by Chiral Dev Team $^{silva ✅ potter 🚧}$
  13. BoltzGen Binder Design by Chiral Dev Team $^{silva ✅ potter 🚧}$

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A collection of workflows

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