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Pathogen Genomics Package 5.6.4

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@ddooley ddooley released this 22 Oct 21:49
· 1 commit to main since this release

This release is a tempate update, and as well fixes an autocomplete feature on single select pulldown menus that cropped up in a previous release.

Template Name Template Versionx.y.z x changes (field) y changes (values/IDs) z changes (defs/formats/examples)
CanCOGeN (SC2) 3.0.0      
DEXA (One Health) 1.2.0      
GISAID (SC2) 1.0.2      
GRDI 15.1.1   Changed: "isolate id" from "GENEPIO:0001195" to "GENEPIO:0001644". Changed "specimen processing" from "GENEPIO:0100435" to "GENEPIO:0001253". Changed "sample_plan_name" from "GENEPIO:0100430" to "GENEPIO:0100285". Corrected broken link between "nucleic_acid_storage_duration_unit" and it's picklist menu.
Mpox 7.6.6   Field and label ID changes (see notes) Added new exports; Corrected mislabeled menus and removed unused schema menus from enums (see notes).
MpoxInternational 9.0.0      
PHA4GE (SC2) 1.0.3     Missing descriptions, comments, and examples restored.
AMBR 2.3.2      
PathogenAgnostic 1.0.1      
NMLPathogenAgnostic 1.0.0      
Influenza 1.1.3   Changed isolate ID from "GENEPIO:0001195" to "GENEPIO:0001644". Change "isolate" field label to "isolate ID". Corrected "related specimen relationship type" by swapping the label and name values. Minor edits: fixed NMLSubmittedSpecimenTypeMenu name, removed unused VaccineNameMenu, Fixed "SequencedByMenu" name.
WWSC2 4.3.3   Empty "diagnostic target presence 2" slot_uri updated to GENEPIO:0100962; corrected "sequenced_by_contact_email" ID to "GENEPIO:0100422"  
WWAMR 4.3.3   Empty "diagnostic target presence 2" slot_uri updated to GENEPIO:0100962; corrected "sequenced_by_contact_email" ID to "GENEPIO:0100422"  
WWPathogenAgnostic (formerly WWSinglePathogen) 4.3.3   Empty "diagnostic target presence 2" slot_uri updated to GENEPIO:0100962; corrected "sequenced by contact email" ID to "GENEPIO:0100422"; corrected "isolate id" ID to "GENEPIO:0001644"  
HPAI 1.0.1     changed some field "names" (not labels) to match with other specifications.
HPAIFood 1.0.1     changed some field "names" (not labels) to match with other specifications.
HPAIWW 1.0.1     changed some field "names" (not labels) to match with other specifications.
HPAIEnviro 1.0.1     changed some field "names" (not labels) to match with other specifications.
HPAIHost 1.0.1     changed some field "names" (not labels) to match with other specifications.
B2B2B 1.1.1   Changed "specimen processing" from "GENEPIO:0100435" to "GENEPIO:0001253". Removed brackets from "name" labels.