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Unify figure style #74

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Merged
merged 11 commits into from
Oct 29, 2025
Merged

Unify figure style #74

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50d1fb0
Unify figure style
schilling40 Sep 29, 2025
06e8ca9
Plotting options for Fig04
schilling40 Sep 30, 2025
703f2e2
Plot shared legend
schilling40 Sep 30, 2025
06951f8
Added standard deviation to trendlines
schilling40 Sep 30, 2025
e31001e
Add supplementary Figure 2, small fixes
schilling40 Oct 1, 2025
373c6bd
Legends disconnected from plots
schilling40 Oct 7, 2025
e5c1d1a
Figure for otof expression efficiency
schilling40 Oct 10, 2025
c110dfe
Initial supplementary figure 02
schilling40 Oct 10, 2025
255e41c
Update Boxplots
schilling40 Oct 21, 2025
033d628
Ordered functions, clean up
schilling40 Oct 22, 2025
543d828
Support new tonotopic mapping of OTOF
schilling40 Oct 29, 2025
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2 changes: 2 additions & 0 deletions flamingo_tools/segmentation/unet_prediction.py
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Original file line number Diff line number Diff line change
Expand Up @@ -571,6 +571,8 @@ def run_unet_prediction_slurm(
"""
os.makedirs(output_folder, exist_ok=True)
prediction_instances = int(prediction_instances)
if isinstance(scale, str):
scale = float(scale)
slurm_task_id = os.environ.get("SLURM_ARRAY_TASK_ID")

if s3 is not None:
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